Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene206356 SustainPine v3.0 755
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.917e-22
Internal
sp_v3.0_unigene206357 SustainPine v3.0 398
• AutoFact: Unassigned protein 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene206358 SustainPine v3.0 533
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 6.038e-11
Internal
sp_v3.0_unigene206359 SustainPine v3.0 634
• AutoFact: Polyprotein n=1 Tax=Drosophila melanogaster RepID=B6V6Z8_DROME 4.2039e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.734e-24
Internal
sp_v3.0_unigene206364 SustainPine v3.0 611
• AutoFact: MADS-box transcription factor n=4 Tax=Spermatophyta RepID=Q8LKX2_9SPER 7.0e-40
• FL-Next: tr=MADS box protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 2.943e-26
N-terminus
sp_v3.0_unigene206408 SustainPine v3.0 342
• AutoFact: Atg8 domain containing protein 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 8 1.955e-13
N-terminus
sp_v3.0_unigene206418 SustainPine v3.0 347
• AutoFact: Putative MADS domain transcription factor GGM10 n=1 Tax=Gnetum gnemon RepID=Q9XGJ7_GNEGN 1.0e-24
• FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: AGAMOUS-like protein 6.691e-28
N-terminus
sp_v3.0_unigene206457 SustainPine v3.0 369
• AutoFact: ABC transporter-like protein (Fragment) n=2 Tax=Picea sitchensis RepID=E0ZDW2_PICSI 3.0e-31
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene206468 SustainPine v3.0 253
• AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: OEE1 8.25701e-41
C-terminus
sp_v3.0_unigene206473 SustainPine v3.0 591
• AutoFact: rve domain containing protein 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.12e-30
Internal
sp_v3.0_unigene206497 SustainPine v3.0 618
• AutoFact: Histidine-containing phosphotransfer protein, putative n=1 Tax=Ricinus communis RepID=B9RSW5_RICCO 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histidine phosphotransfer protein 1.005e-25
Putative Complete
sp_v3.0_unigene206578 SustainPine v3.0 446
• AutoFact: Putative MADS domain transcription factor GGM11 n=1 Tax=Gnetum gnemon RepID=Q9XGJ6_GNEGN 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MADS box protein 2.68e-19
N-terminus
sp_v3.0_unigene206584 SustainPine v3.0 515
• AutoFact: RVT_2 domain containing protein 8.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.432e-10
Putative C-terminus
sp_v3.0_unigene206587 SustainPine v3.0 963
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.132e-14
N-terminus
sp_v3.0_unigene206606 SustainPine v3.0 481
• AutoFact: EF hand family protein n=1 Tax=Zea mays RepID=B6U4W9_MAIZE 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene206618 SustainPine v3.0 646
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U1S0_PHYPA 2.0e-13
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene206619 SustainPine v3.0 513
• AutoFact: Unassigned protein 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene206641 SustainPine v3.0 261
• AutoFact: Copia-like retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE4_ARATH 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gag-Pol polyprotein 2.641e-07
Internal
sp_v3.0_unigene206667 SustainPine v3.0 534
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=15 Tax=core eudicotyledons RepID=CYPH_CATRO 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene206680 SustainPine v3.0 383
• AutoFact: Vacuolar ATP synthase subunit G plant, putative n=1 Tax=Ricinus communis RepID=B9SUA9_RICCO 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Vacuolar ATP synthase subunit G plant, putative 3.401e-08
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain