Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene624 SustainPine v3.0 2918
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: WD-repeat protein, putative 1.062e-11
C-terminus
sp_v3.0_unigene625 SustainPine v3.0 301
AutoFact: WD-40 repeat protein-like (Fragment) n=1 Tax=Populus suaveolens RepID=Q1HIU4_9ROSI 3.0e-15
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 3.815e-07
Internal
sp_v3.0_unigene653 SustainPine v3.0 840
AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 7.0e-24
FL-Next: sp=E3 ubiquitin-protein ligase RHA1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene654 SustainPine v3.0 1453
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: WD-repeat protein, putative 2.547e-09
Putative C-terminus
sp_v3.0_unigene667 SustainPine v3.0 2713
AutoFact: DNA repair and recombination protein RAD54B, putative n=1 Tax=Ricinus communis RepID=B9RYJ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 super family 6.56e-12
Complete
sp_v3.0_unigene680 SustainPine v3.0 4309
AutoFact: putative serine/threonine-protein kinase WNK6 [Arabidopsis thaliana] ref|NP_001189928.1| putative serine/threonine-protein kinase WNK6 [Arabidopsis thaliana] sp|Q8S8Y8.1|WNK6_ARATH RecName: Full=Probable serine/threonine-protein kinase WNK6; Short=AtWNK6; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: With no lysine kinase 1.511e-39
Complete
sp_v3.0_unigene681 SustainPine v3.0 1639
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.754e-19
C-terminus
sp_v3.0_unigene709 SustainPine v3.0 3272
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene713 SustainPine v3.0 2977
AutoFact: serine/threonine-protein kinase-like protein CCR1 [Arabidopsis thaliana] sp|Q9S7D9.1|ACCR1_ARATH RecName: Full=Serine/threonine-protein kinase-like protein CCR1; AltName: Full=Protein CRINKLY 4 RELATED 1; Short=AtCRR1; Flags: Precursor gb|AAF23257.1|AC015 0.0
FL-Next: sp=Serine/threonine-protein kinase-like protein CCR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP binding protein, putative 9.225e-07
Complete
sp_v3.0_unigene715 SustainPine v3.0 3097
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine Rich Repeat family protein, expressed 6.67e-06
Complete
sp_v3.0_unigene720 SustainPine v3.0 2602
AutoFact: wall-associated receptor kinase-like 14 [Arabidopsis thaliana] ref|NP_850041.1| wall-associated receptor kinase-like 14 [Arabidopsis thaliana] sp|Q8RY67.2|WAKLO_ARATH RecName: Full=Wall-associated receptor kinase-like 14; Flags: Precursor gb|AAC23760.2| p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Wall-associated kinase, putative 2.548e-17
Putative C-terminus
sp_v3.0_unigene742 SustainPine v3.0 1719
AutoFact: ubiquitin-protein ligase RNF25 [Arabidopsis thaliana] gb|AAY57602.1| RING finger family protein [Arabidopsis thaliana] gb|AEE80040.1| ubiquitin-protein ligase RNF25 [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene752 SustainPine v3.0 3626
AutoFact: Sumo ligase, putative n=1 Tax=Ricinus communis RepID=B9SK46_RICCO 0.0
FL-Next: sp=E3 SUMO-protein ligase SIZ1; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene754 SustainPine v3.0 1925
AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fertilization-independent endosperm protein 2.907e-19
Complete
sp_v3.0_unigene763 SustainPine v3.0 2217
AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein AT4g23860; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene770 SustainPine v3.0 1974
AutoFact: Brushy protein, putative n=1 Tax=Ricinus communis RepID=B9RTZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene773 SustainPine v3.0 2098
AutoFact: putative thaumatin-like protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thaumatin-like protein 0.0
Complete
sp_v3.0_unigene798 SustainPine v3.0 1646
AutoFact: gamma-secretase subunit APH1-like protein [Arabidopsis thaliana] sp|Q8L9G7.2|APH1_ARATH RecName: Full=Gamma-secretase subunit APH1-like gb|AAL36063.1| At2g31440/T28P16.7 [Arabidopsis thaliana] gb|AAD26475.2| unknown protein [Arabidopsis thaliana] gb|AAM19 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene799 SustainPine v3.0 1417
AutoFact: Leucine-rich repeat protein kinase-like protein n=2 Tax=Arabidopsis RepID=Q8GY50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene800 SustainPine v3.0 3221
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TE17_PHYPA 0.0
FL-Next: sp=AT-rich interactive domain-containing protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ARID/BRIGHT DNA-binding domain-containing protein 2.308e-08
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain