Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3062 SustainPine v3.0 3706
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9HYM3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair helicase rad5,16, putative 9.176e-11
Putative Complete
sp_v3.0_unigene3065 SustainPine v3.0 2363
AutoFact: putative poly-glutamine tract-binding protein [Oryza sativa Japonica Group] dbj|BAD87726.1| putative poly-glutamine tract-binding protein [Oryza sativa Japonica Group] dbj|BAG95893.1| unnamed protein product [Oryza sativa Japonica Group] 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene3073 SustainPine v3.0 4318
AutoFact: putative inactive receptor kinase [Arabidopsis thaliana] sp|Q0WR59.2|Y5020_ARATH RecName: Full=Probable inactive receptor kinase At5g10020; Flags: Precursor gb|ACN59365.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gb|AED91482 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene3075 SustainPine v3.0 2848
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: Katanin p60 ATPase-containing subunit, putative 2.636e-07
Complete
sp_v3.0_unigene3084 SustainPine v3.0 928
AutoFact: cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] dbj|BAC43097.1| putative receptor-like protein kinase 5 RLK5 [Arabidopsis thaliana] gb|AEE84715.1| cysteine-rich receptor-like protein kinase 6 [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 9.321e-20
C-terminus
sp_v3.0_unigene3085 SustainPine v3.0 2515
AutoFact: DWNN domain, a CCHC-type zinc finger [Arabidopsis thaliana] gb|AED95509.1| DWNN domain, a CCHC-type zinc finger [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene3105 SustainPine v3.0 2428
AutoFact: Chaperone clpb, putative n=1 Tax=Ricinus communis RepID=B9RNX1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 101 7.714e-16
Complete
sp_v3.0_unigene3126 SustainPine v3.0 3276
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr18 scaffold_121, whole genome shotgun sequence 5.315e-06
Complete
sp_v3.0_unigene3130 SustainPine v3.0 1552
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: Extensin-like protein 5.36e-31
N-terminus
sp_v3.0_unigene3139 SustainPine v3.0 3437
AutoFact: receptor-like protein kinase THESEUS 1 [Arabidopsis thaliana] sp|Q9LK35.1|THE1_ARATH RecName: Full=Receptor-like protein kinase THESEUS 1; Flags: Precursor dbj|BAA98098.1| receptor-protein kinase-like protein [Arabidopsis thaliana] gb|AED96490.1| receptor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FERONIA receptor-like kinase 3.696e-18
Complete
sp_v3.0_unigene3141 SustainPine v3.0 1123
AutoFact: methyl-CPG-binding domain 9 [Arabidopsis thaliana] sp|Q9SGH2.1|MBD9_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 9; Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl tranferase MBD9; AltName: Full=Methyl-CpG-binding protein MBD9 5.60519e-45
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene3150 SustainPine v3.0 1031
AutoFact: pfam08241, Methyltransf_11, Methyltransferase domain 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATRAD3, putative 3.56e-17
C-terminus
sp_v3.0_unigene3179 SustainPine v3.0 2851
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene3186 SustainPine v3.0 1077
AutoFact: Os07g0673500 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0D3Q1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Arginine/serine-rich splicing factor, putative 1.249e-13
N-terminus
sp_v3.0_unigene3187 SustainPine v3.0 1477
AutoFact: 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 3-hydroxyisobutyrate dehydrogenase-like protein 5.523e-09
Complete
sp_v3.0_unigene3194 SustainPine v3.0 2141
AutoFact: gamma-glutamyl transpeptidase 4 [Arabidopsis thaliana] emb|CAB79679.1| gamma-glutamyltransferase-like protein [Arabidopsis thaliana] gb|AAO64159.1| putative gamma-glutamyltransferase [Arabidopsis thaliana] dbj|BAF00492.1| gamma-glutamyltransferase-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Gamma-glutamyl transferase 5.686e-13
Complete
sp_v3.0_unigene3199 SustainPine v3.0 2017
AutoFact: Dof zinc finger protein DOF5.2 [Arabidopsis thaliana] ref|NP_851106.1| Dof zinc finger protein DOF5.2 [Arabidopsis thaliana] sp|Q93ZL5.2|DOF52_ARATH RecName: Full=Dof zinc finger protein DOF5.2; Short=AtDOF5.2 gb|AAU90081.1| At5g39660 [Arabidopsis thalian 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: F-box family protein 3.157e-29
C-terminus
sp_v3.0_unigene3216 SustainPine v3.0 1931
AutoFact: Glutaredoxin family protein [Arabidopsis thaliana] gb|AAD03427.1| F3H7.9 gene product [Arabidopsis thaliana] emb|CAB40029.1| putative protein [Arabidopsis thaliana] emb|CAB78186.1| putative protein [Arabidopsis thaliana] gb|AEE82911.1| Glutaredoxin family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Electron transporter, putative 2.261e-08
C-terminus
sp_v3.0_unigene3221 SustainPine v3.0 3935
AutoFact: vacuolar protein sorting 11 protein [Arabidopsis thaliana] gb|AAL32006.1|AF436824_1 At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AAD29055.1| expressed protein [Arabidopsis thaliana] gb|AAO11614.1| At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AEC05900.1| vacuo 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene3224 SustainPine v3.0 1882
AutoFact: Putative sinapyl alcohol dehydrogenase (Fragment) n=1 Tax=Pinus banksiana RepID=E5F5P1_PINBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamyl alcohol dehydrogenase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain