Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2656 SustainPine v3.0 3736
• AutoFact: AP-1 complex subunit gamma-2, putative n=1 Tax=Ricinus communis RepID=B9S4M0_RICCO 0.0
• FL-Next: sp=AP-1 complex subunit gamma-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative gamma-adaptin 1 1.262e-08
Complete
sp_v3.0_unigene2657 SustainPine v3.0 3541
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RS95_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2658 SustainPine v3.0 2771
• AutoFact: YTH domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Yth domain-containing protein, putative 6.029e-11
Complete
sp_v3.0_unigene2666 SustainPine v3.0 1616
• AutoFact: ERM multi-domain protein 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Complete
sp_v3.0_unigene2670 SustainPine v3.0 1287
• AutoFact: Transcription Factor IIF, Rap30/Rap74, interaction [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transcription Factor IIF, Rap30/Rap74, interaction 5.523e-09
Putative Complete
sp_v3.0_unigene2683 SustainPine v3.0 2843
• AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene2691 SustainPine v3.0 1804
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RWX1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 2.908e-15
Complete
sp_v3.0_unigene2719 SustainPine v3.0 824
• AutoFact: PHD finger-containing protein n=3 Tax=Arabidopsis RepID=Q0WKW1_ARATH 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene2725 SustainPine v3.0 3491
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: sp=Coatomer subunit gamma-2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene2726 SustainPine v3.0 1431
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L102_MALDO 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 5.19882e-43
Complete
sp_v3.0_unigene2738 SustainPine v3.0 1220
• AutoFact: zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] ref|NP_850780.1| zinc finger CCCH domain-containing protein 51 [Arabidopsis thaliana] sp|Q9FNG6.1|C3H51_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 51; Short=AtC3H51 d 0.0
• FL-Next: sp=Zinc finger CCCH domain-containing protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RING finger protein 113A, putative 8.985e-09
Putative Complete
sp_v3.0_unigene2746 SustainPine v3.0 2250
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene2751 SustainPine v3.0 1434
• AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Trithorax, putative 2.532e-08
Putative Complete
sp_v3.0_unigene2753 SustainPine v3.0 5002
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.451e-11
Complete
sp_v3.0_unigene2763 SustainPine v3.0 2135
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.401e-22
C-terminus
sp_v3.0_unigene2770 SustainPine v3.0 1358
• AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 0.0
• FL-Next: sp=NAC domain-containing protein 68; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene2779 SustainPine v3.0 2616
• AutoFact: putative somatic embryogenesis protein kinase 1 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Leucine rich repeat receptor kinase, putative 9.925e-24
Complete
sp_v3.0_unigene2791 SustainPine v3.0 2228
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|ABF57286.1| At1g77250 [Arabidopsis thaliana] gb|AEE35954.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene2801 SustainPine v3.0 524
• AutoFact: Extensin_2 multi-domain protein 7.0e-21
• Sma3: Extensin 0.0
coding
sp_v3.0_unigene2802 SustainPine v3.0 1791
• AutoFact: ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Arginine/serine-rich splicing factor, putative 1.89e-13
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain