Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2136 SustainPine v3.0 1621
AutoFact: [R] COG2319 FOG: WD40 repeat 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase protein cop1, putative 8.756e-14
C-terminus
sp_v3.0_unigene2142 SustainPine v3.0 2647
AutoFact: Phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|O80970.1|NPY2_ARATH RecName: Full=BTB/POZ domain-containing protein NPY2; AltName: Full=Protein NAKED PINS IN YUC MUTANTS 2 gb|AAC24177.1| hypothetical protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Signal transducer, putative 2.206e-13
Complete
sp_v3.0_unigene2166 SustainPine v3.0 2616
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-related protein 5 2.574e-09
Complete
sp_v3.0_unigene2167 SustainPine v3.0 1931
AutoFact: Probable plastid-lipid-associated protein 3, chloroplastic n=2 Tax=Oryza sativa Japonica Group RepID=PAP3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fibrillin 8.043e-12
Complete
sp_v3.0_unigene2177 SustainPine v3.0 1767
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene2200 SustainPine v3.0 511
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene2201 SustainPine v3.0 1432
AutoFact: R2R3-MYB transcription factor MYB4 n=1 Tax=Picea glauca RepID=A5JYE8_PICGL 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 2.806e-34
Complete
sp_v3.0_unigene2202 SustainPine v3.0 2281
AutoFact: protein kinase-like protein [Arabidopsis thaliana] sp|O64639.1|Y2559_ARATH RecName: Full=Receptor-like serine/threonine-protein kinase At2g45590 gb|AAC06160.1| putative protein kinase [Arabidopsis thaliana] gb|AAO22616.1| putative protein kinase [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative S-domain receptor-like protein kinase 1.047e-10
C-terminus
sp_v3.0_unigene2245 SustainPine v3.0 3270
AutoFact: Tir-nbs-lrr resistance protein n=1 Tax=Populus trichocarpa RepID=B9N1N5_POPTR 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene2247 SustainPine v3.0 2311
AutoFact: plant intracellular ras group-related LRR 4 [Arabidopsis thaliana] emb|CAB54875.1| putative protein [Arabidopsis thaliana] emb|CAB80263.1| putative protein [Arabidopsis thaliana] gb|AAL61931.1| putative protein [Arabidopsis thaliana] gb|AAM91130.1| putati 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Leucine-rich repeat-containing protein, putative 5.113e-09
Complete
sp_v3.0_unigene2256 SustainPine v3.0 3772
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone ubiquitination proteins group 1.003e-08
Complete
sp_v3.0_unigene2272 SustainPine v3.0 1125
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z9_MALDO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.535e-33
N-terminus
sp_v3.0_unigene2274 SustainPine v3.0 1147
AutoFact: putative receptor ser/thr protein [Oryza sativa Japonica Group] gb|ABF95119.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.109e-12
C-terminus
sp_v3.0_unigene2279 SustainPine v3.0 2587
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene2286 SustainPine v3.0 1232
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0T3_RICCO 4.0e-32
FL-Next: sp=Dof zinc finger protein DOF2.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dof zinc finger protein 3.167e-11
Complete
sp_v3.0_unigene2292 SustainPine v3.0 846
AutoFact: SDA1 multi-domain protein 1.0e-10
coding
sp_v3.0_unigene2301 SustainPine v3.0 4162
AutoFact: Pseudo response regulator n=3 Tax=Populus RepID=B9HM08_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pseudo-response regulator 59 homologue 6.743e-09
Complete
sp_v3.0_unigene2327 SustainPine v3.0 1726
AutoFact: Os11g0102600 protein n=3 Tax=Oryza sativa RepID=Q2QYY5_ORYSJ 0.0
FL-Next: tr=Os11g0102600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Tonneau 1b 9.242e-18
Complete
sp_v3.0_unigene2329 SustainPine v3.0 1129
AutoFact: pfam10174, Cast, RIM-binding protein of the cytomatrix active zone 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: SMC-like protein 1.111e-09
Internal
sp_v3.0_unigene2336 SustainPine v3.0 587
AutoFact: FAP multi-domain protein 2.0e-15
Sma3: Anther-specific proline rich protein 1.837e-06
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain