Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1875 SustainPine v3.0 5252
• AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 0.0
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromatin remodeling complex subunit 1.086e-16
Complete
sp_v3.0_unigene1876 SustainPine v3.0 2292
• AutoFact: TFIIB-related protein (Fragment) n=1 Tax=Spinacia oleracea RepID=Q93YB0_SPIOL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TFIIB-related protein 2.662e-13
C-terminus
sp_v3.0_unigene1878 SustainPine v3.0 1134
• AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 0.0
• FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Pre-mRNA-splicing factor prp45 2.076e-09
Putative Complete
sp_v3.0_unigene1879 SustainPine v3.0 3620
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TEH2_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Extensin 3.825e-13
Complete
sp_v3.0_unigene1884 SustainPine v3.0 2761
• AutoFact: Heat shock 70 kDa protein, mitochondrial n=3 Tax=rosids RepID=HSP7M_PHAVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
Complete
sp_v3.0_unigene1888 SustainPine v3.0 2212
• AutoFact: protein kinase-like protein [Arabidopsis thaliana] sp|Q5XF57.1|Y5576_ARATH RecName: Full=Probable receptor-like serine/threonine-protein kinase At5g57670 gb|AAU90049.1| At5g57670 [Arabidopsis thaliana] gb|AAW30041.1| At5g57670 [Arabidopsis thaliana] gb|AE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 1.478e-19
Complete
sp_v3.0_unigene1892 SustainPine v3.0 2855
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_91, whole genome shotgun sequence 1.949e-08
Complete
sp_v3.0_unigene1897 SustainPine v3.0 1555
• AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9R9V0_RICCO 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Receptor protein kinase CLAVATA1, putative 3.695e-15
Internal
sp_v3.0_unigene1900 SustainPine v3.0 1096
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z5_MALDO 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 1.677e-25
Putative C-terminus
sp_v3.0_unigene1904 SustainPine v3.0 2736
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 1.3e-08
N-terminus
sp_v3.0_unigene1911 SustainPine v3.0 2927
• AutoFact: Keratin_B2 multi-domain protein 1.0e-05
• FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1915 SustainPine v3.0 1248
• AutoFact: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHD1_RICCO 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene1940 SustainPine v3.0 1268
• AutoFact: TPA_exp: E3 ubiquitin ligase [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 1.404e-08
C-terminus
sp_v3.0_unigene1946 SustainPine v3.0 1330
• AutoFact: PREDICTED: similar to glutaredoxin family protein n=1 Tax=Vitis vinifera RepID=UPI0001983D8F 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Electron transporter, putative 1.049e-14
C-terminus
sp_v3.0_unigene1948 SustainPine v3.0 3226
• AutoFact: Ethylene receptor homolog n=2 Tax=Physcomitrella patens RepID=A9CPF1_9BRYO 0.0
• FL-Next: tr=ETR2 ethylene receptor; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Ethylene receptor 0.0
Complete
sp_v3.0_unigene1953 SustainPine v3.0 1572
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1965 SustainPine v3.0 1793
• AutoFact: U-box domain-containing protein 13 [Arabidopsis thaliana] sp|Q9SNC6.1|PUB13_ARATH RecName: Full=U-box domain-containing protein 13; AltName: Full=Plant U-box protein 13 emb|CAB62321.1| arm repeat containing protein homolog [Arabidopsis thaliana] gb|AAK687 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein 11 5.098e-10
Complete
sp_v3.0_unigene1971 SustainPine v3.0 2114
• AutoFact: Cyclin B1-2 [Daucus carota] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 1.626e-18
Complete
sp_v3.0_unigene1979 SustainPine v3.0 1594
• AutoFact: Guanine nucleotide-binding protein subunit beta n=11 Tax=Poaceae RepID=GBB_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Guanine nucleotide-binding protein subunit beta 3.28e-11
Putative Complete
sp_v3.0_unigene1985 SustainPine v3.0 3554
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJW4_RICCO 0.0
• FL-Next: sp=Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 6.214e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain