Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8 SustainPine v3.0 2639
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] dbj|BAB01754.1| GloEL protein; chaperonin, 60 kDa [Arabidopsis thaliana] gb|AEE75362.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene16 SustainPine v3.0 3247
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Glycine-rich protein 1.501e-14
Complete
sp_v3.0_unigene26 SustainPine v3.0 519
AutoFact: Low molecular weight heat-shock protein n=7 Tax=Pinaceae RepID=Q40935_PSEMZ 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat-shock protein, putative 3.281e-34
C-terminus
sp_v3.0_unigene97 SustainPine v3.0 2787
AutoFact: [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase 2.0e-06
FL-Next: sp=Methionine S-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AdoMet:Met S-methyltransferase 1.846e-17
C-terminus
sp_v3.0_unigene189 SustainPine v3.0 2251
AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene190 SustainPine v3.0 1747
AutoFact: histone deacetylase 15 [Arabidopsis thaliana] gb|AEE76110.1| histone deacetylase 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone deacetylase 4.049e-14
C-terminus
sp_v3.0_unigene230 SustainPine v3.0 4139
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-3, putative 1.529e-08
Complete
sp_v3.0_unigene245 SustainPine v3.0 1743
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Yth domain-containing protein, putative 4.285e-27
Putative C-terminus
sp_v3.0_unigene248 SustainPine v3.0 4442
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AEE35463.1| protein kinase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene256 SustainPine v3.0 441
AutoFact: Putative sinapyl alcohol dehydrogenase (Fragment) n=2 Tax=Pinus RepID=E5F5N9_PINAR 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamyl alcohol dehydrogenase 0.0
C-terminus
sp_v3.0_unigene257 SustainPine v3.0 732
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 0.0
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Sma3: Copalyl diphosphate synthase 6.134e-18
Putative N-terminus
sp_v3.0_unigene258 SustainPine v3.0 3223
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dynamin, putative 2.852e-10
Complete
sp_v3.0_unigene268 SustainPine v3.0 2411
AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] gb|AAF23199.1|AC016795_12 putative T-complex protein 1, ETA subunit [Arabidopsis thaliana] gb|AAL49938.1| AT3g11830/F26K24_12 [Arabidopsis thaliana] gb|AAM26704.1| AT3g11830/F26K24_12 [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene284 SustainPine v3.0 2057
AutoFact: kinesin family member 4/7/21/27 [Arabidopsis thaliana] ref|NP_851151.1| kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb|AAN86114.1| kinesin-like protein [Arabidopsis thaliana] gb|AAN86115.1| kinesin-like protein [Arabidopsis thaliana] gb|AED9557 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus
sp_v3.0_unigene300 SustainPine v3.0 1608
AutoFact: kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb|AED97398.1| kinesin family member 4/7/21/27 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin-like protein 1.754e-10
Putative N-terminus
sp_v3.0_unigene316 SustainPine v3.0 2472
AutoFact: CBL-interacting protein kinase 3 n=8 Tax=rosids RepID=A0MNJ1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CBL-interacting serine/threonine-protein kinase, putative 1.304e-34
Complete
sp_v3.0_unigene354 SustainPine v3.0 1278
AutoFact: glycolipid transfer protein-like protein [Arabidopsis thaliana] gb|AAC16265.1| unknown protein [Arabidopsis thaliana] gb|AAS76271.1| At2g34690 [Arabidopsis thaliana] gb|AEC09010.1| glycolipid transfer protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr11 scaffold_177, whole genome shotgun sequence 1.376e-06
Complete
sp_v3.0_unigene389 SustainPine v3.0 1440
AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 0.0
FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Auxin efflux carrier component 0.0
N-terminus
sp_v3.0_unigene403 SustainPine v3.0 1855
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 4.649e-12
Putative Complete
sp_v3.0_unigene409 SustainPine v3.0 1900
AutoFact: CRAL_TRIO multi-domain protein 3.0e-22
FL-Next: sp=Patellin-6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Patellin-5 9.317e-16
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain