Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene209100 SustainPine v3.0 243
• AutoFact: Probable glutathione S-transferase n=1 Tax=Picea mariana RepID=O65056_PICMA 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase GSTU6 9.44e-38
N-terminus
sp_v3.0_unigene209121 SustainPine v3.0 560
• AutoFact: RuBisCO subunit binding-protein beta subunit (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q56ZP2_ARATH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RuBisCO large subunit-binding protein subunit beta, chloroplastic 1.148e-10
C-terminus
sp_v3.0_unigene209141 SustainPine v3.0 615
• AutoFact: Kelch repeat containing protein n=3 Tax=Oryza sativa RepID=Q6ZXK6_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene209174 SustainPine v3.0 705
• AutoFact: putative glutathione S-transferase OsGSTF3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione S-transferase 1.10703e-43
Putative Complete
sp_v3.0_unigene209185 SustainPine v3.0 1654
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Complete
sp_v3.0_unigene209201 SustainPine v3.0 631
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 3.00018e-42
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene209207 SustainPine v3.0 547
• AutoFact: 2-oxoglutarate-dependent dioxygenase n=1 Tax=Populus trichocarpa RepID=B9N4U2_POPTR 7.00649e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr3 scaffold_8, whole genome shotgun sequence 9.283e-16
C-terminus
sp_v3.0_unigene209211 SustainPine v3.0 451
• AutoFact: Pinoresinol-lariciresinol reductase TH2 n=2 Tax=Tsuga heterophylla RepID=Q9M520_TSUHE 0.0
• FL-Next: tr=Pinoresinol-lariciresinol reductase TH2; Tsuga heterophylla (Western hemlock) (Abies heterophylla). 0.0
• Sma3: Pinoresinol-lariciresinol reductase 6.409e-26
Internal
sp_v3.0_unigene209222 SustainPine v3.0 282
• AutoFact: CCR4-NOT transcription complex subunit 6 n=1 Tax=Zea mays RepID=B6SJQ2_MAIZE 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Misassembled
sp_v3.0_unigene209224 SustainPine v3.0 280
• AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 9.959e-09
Internal
sp_v3.0_unigene209232 SustainPine v3.0 208
• AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene209294 SustainPine v3.0 523
• AutoFact: Peptidyl-prolyl cis-trans isomerase-like 3 n=2 Tax=Dictyostelium RepID=PPIL3_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene209302 SustainPine v3.0 670
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 2.114e-34
N-terminus
sp_v3.0_unigene209308 SustainPine v3.0 535
• AutoFact: FAP multi-domain protein 7.0e-19
• Sma3: Glycine-rich protein 1.108e-14
coding
sp_v3.0_unigene209335 SustainPine v3.0 763
• AutoFact: 78 kDa glucose-regulated protein precursor [Neurospora crassa OR74A] sp|P78695.3|GRP78_NEUCR RecName: Full=78 kDa glucose-regulated protein homolog; Short=GRP-78; AltName: Full=Immunoglobulin heavy chain-binding protein homolog; Short=BiP; Flags: Precurso 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene209336 SustainPine v3.0 574
• AutoFact: Cytosolic glycoprotein FP21 n=2 Tax=Dictyosteliida RepID=D3B7B4_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.598e-23
Complete
sp_v3.0_unigene209483 SustainPine v3.0 584
• AutoFact: Alpha-humulene synthase n=2 Tax=Picea RepID=F2XF97_PICGL 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Longifolene synthase 1.114e-09
C-terminus
sp_v3.0_unigene209499 SustainPine v3.0 385
• AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta-1 chain 1.866e-09
Internal
sp_v3.0_unigene209558 SustainPine v3.0 934
• AutoFact: Glucan endo-1,3-beta-glucosidase, putative n=1 Tax=Ricinus communis RepID=B9RBE5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glucan endo-1,3-beta-glucosidase, putative 1.086e-33
C-terminus
sp_v3.0_unigene209567 SustainPine v3.0 940
• AutoFact: 1(10),5-germacradien-4-ol synthase n=1 Tax=Pinus sylvestris RepID=B4XAK5_PINSY 0.0
• FL-Next: tr=1(10),5-germacradien-4-ol synthase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Longifolene synthase 1.374e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain