Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene203506 SustainPine v3.0 497
• AutoFact: Translationally-controlled tumor protein homolog n=1 Tax=Gibberella zeae PH-1 RepID=TCTP_GIBZE 1.4013e-45
• FL-Next: sp=Translationally-controlled tumor protein homolog; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Translationally-controlled tumor protein homolog 4.26e-15
N-terminus
sp_v3.0_unigene203619 SustainPine v3.0 627
• AutoFact: SCF ubiquitin ligase complex protein SKP1a n=3 Tax=Dictyostelium RepID=SKP1A_DICDI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fimbriata-associated protein 6.509e-23
Complete
sp_v3.0_unigene203639 SustainPine v3.0 508
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene203705 SustainPine v3.0 468
• AutoFact: Beta-tubulin, putative n=3 Tax=Eukaryota RepID=C5KEN3_9ALVE 9.80909e-45
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Beta-tubulin 2.879e-12
Complete
sp_v3.0_unigene203709 SustainPine v3.0 500
• AutoFact: PREDICTED: similar to cytoplasmic beta-actin n=1 Tax=Canis lupus familiaris RepID=UPI00005A055D 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin 1.16e-25
C-terminus
sp_v3.0_unigene203738 SustainPine v3.0 273
• AutoFact: Ubiquitin, putative n=2 Tax=Eukaryota RepID=D0NEJ7_PHYIT 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene203806 SustainPine v3.0 457
• AutoFact: Tau class glutathione S-transferase n=3 Tax=Pinus RepID=Q4PNY9_PINTB 0.0
• FL-Next: tr=Tau class glutathione S-transferase; Pinus tabuliformis (Chinese pine) (Pinus leucosperma). 0.0
• Sma3: Glutathione S-transferase GSTU6 0.0
N-terminus
sp_v3.0_unigene203900 SustainPine v3.0 274
• AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Pleurotus ostreatus RepID=Q96TV2_PLEOS 4.0e-35
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene203917 SustainPine v3.0 380
• AutoFact: Ubiquitin/ribosomal fusion protein n=2 Tax=Ajellomyces dermatitidis RepID=F2TQT1_AJEDE 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CEP52 3.367e-07
C-terminus
sp_v3.0_unigene203947 SustainPine v3.0 387
• AutoFact: monodehydroascorbate reductase [Acanthus ebracteatus] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Monodehydroascorbate reductase 2.10195e-44
Putative C-terminus
sp_v3.0_unigene203960 SustainPine v3.0 454
• AutoFact: CSN complex subunit 6A [Arabidopsis thaliana] 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: COP9 signalosome complex subunit 6a 1.521e-13
C-terminus
sp_v3.0_unigene203967 SustainPine v3.0 468
• AutoFact: Cytosolic aldehyde dehydrogenase n=1 Tax=Oryza sativa Japonica Group RepID=Q9LRE9_ORYSJ 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aldehyde dehydrogenase 1.128e-31
Putative N-terminus
sp_v3.0_unigene204007 SustainPine v3.0 263
• AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=A9PL93_POPTR 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AP2/ERF domain-containing transcription factor 4.47e-26
Internal
sp_v3.0_unigene204073 SustainPine v3.0 366
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.991e-13
C-terminus
sp_v3.0_unigene204103 SustainPine v3.0 480
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 3.0e-17
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene204157 SustainPine v3.0 341
• AutoFact: CBL-interacting protein kinase-like protein (Fragment) n=42 Tax=Picea sitchensis RepID=E0ZAQ0_PICSI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CBL-interacting serine/threonine-protein kinase, putative 5.197e-06
Internal
sp_v3.0_unigene204167 SustainPine v3.0 471
• AutoFact: Low molecular weight heat-shock protein n=7 Tax=Pinaceae RepID=Q40935_PSEMZ 1.0e-32
• FL-Next: tr=Low molecular weight heat-shock protein; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Heat-shock protein, putative 4.858e-25
N-terminus
sp_v3.0_unigene204256 SustainPine v3.0 354
• AutoFact: Putative sinapyl alcohol dehydrogenase (Fragment) n=2 Tax=Pinus RepID=E5F5N9_PINAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cinnamyl alcohol dehydrogenase 0.0
N-terminus
sp_v3.0_unigene204278 SustainPine v3.0 297
• AutoFact: Transaldolase n=1 Tax=Dimocarpus longan RepID=B7UCK2_9ROSI 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Transaldolase 1.076e-10
Internal
sp_v3.0_unigene204420 SustainPine v3.0 268
• AutoFact: 14-3-3 zeta-like type I [Penaeus monodon] 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 14-3-3 protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain