Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene194284 SustainPine v3.0 425
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene194378 SustainPine v3.0 439
• AutoFact: BEL1-related homeotic protein 30 [Solanum tuberosum] 2.0e-40
• FL-Next: sp=BEL1-like homeodomain protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Bel1 homeotic protein, putative 7.773e-28
Internal
sp_v3.0_unigene194393 SustainPine v3.0 316
• AutoFact: Putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase n=3 Tax=Arabidopsis RepID=F4IFC5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene194551 SustainPine v3.0 351
unknown
sp_v3.0_unigene194808 SustainPine v3.0 446
• AutoFact: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] gb|AAK55737.1|AF380656_1 AT5g16010/F1N13_150 [Arabidopsis thaliana] emb|CAC01800.1| steroid 5alpha-reductase-like protein [Arabidopsis thaliana] gb|AAN64521.1| At5g16010/F1N13_150 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 1.319e-09
C-terminus
sp_v3.0_unigene194919 SustainPine v3.0 403
• AutoFact: Phytochrome N (Fragment) n=12 Tax=Pinaceae RepID=Q9FSD5_PINSY 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Phytochrome A 0.0
Internal
sp_v3.0_unigene194952 SustainPine v3.0 411
• AutoFact: kinesin family member 4/7/21/27 [Arabidopsis thaliana] ref|NP_851151.1| kinesin family member 4/7/21/27 [Arabidopsis thaliana] gb|AAN86114.1| kinesin-like protein [Arabidopsis thaliana] gb|AAN86115.1| kinesin-like protein [Arabidopsis thaliana] gb|AED9557 5.0e-38
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Kinesin-like protein 7.157e-12
Internal
sp_v3.0_unigene194972 SustainPine v3.0 390
• AutoFact: Auxin-induced protein 4 n=1 Tax=Pinus taeda RepID=Q7XYT3_PINTA 9.0e-23
• FL-Next: tr=Auxin-induced protein 4; Pinus taeda (Loblolly pine). 0.0
• Sma3: Aux/IAA protein 5.893e-30
C-terminus
sp_v3.0_unigene195046 SustainPine v3.0 241
• AutoFact: nucleosome chromatin assembly protein [Oryza sativa Indica Group] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 1.428e-10
Putative N-terminus
sp_v3.0_unigene195089 SustainPine v3.0 954
• AutoFact: S-adenosylmethionine synthase 1 (Fragment) n=2 Tax=Magnoliophyta RepID=METK1_PETCR 0.0
• FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 8.47601e-40
C-terminus
sp_v3.0_unigene195101 SustainPine v3.0 156
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 2.0e-08
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene195167 SustainPine v3.0 516
• AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9SP63_RICCO 3.0e-33
• FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
• Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene195366 SustainPine v3.0 304
• AutoFact: Protein argonaute 7 n=3 Tax=Oryza sativa RepID=AGO7_ORYSJ 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Argonaute protein group 1.402e-36
Internal
sp_v3.0_unigene195377 SustainPine v3.0 362
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SEN4_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 5.928e-30
Internal
sp_v3.0_unigene195389 SustainPine v3.0 279
• AutoFact: GAPN n=3 Tax=Physcomitrella patens RepID=E1C9N3_PHYPA 2.0e-26
• FL-Next: sp=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Apium graveolens (Celery). 0.0
• Sma3: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 1.952e-18
Internal
sp_v3.0_unigene195793 SustainPine v3.0 243
• AutoFact: Actin domain-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PJ18_9MYCE 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Actin 5 3.851e-08
Internal
sp_v3.0_unigene196041 SustainPine v3.0 398
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.766e-15
N-terminus
sp_v3.0_unigene196087 SustainPine v3.0 339
• AutoFact: Phenylcoumaran benzylic ether reductase homolog TH6 n=4 Tax=Pinaceae RepID=Q9M523_TSUHE 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pterocarpan reductase 2.142e-11
Internal
sp_v3.0_unigene196102 SustainPine v3.0 432
• AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene196349 SustainPine v3.0 319
• AutoFact: anionic peroxidase swpb1 [Ipomoea batatas] 4.0e-13
• FL-Next: tr=SPI2 protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Class III peroxidase 3.547e-06
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain