Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene6508 SustainPine v3.0 903
• AutoFact: Heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9S3B4_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat-shock protein, putative 1.367e-16
C-terminus
sp_v3.0_unigene6533 SustainPine v3.0 2922
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: KOB1 2.076e-09
Putative Complete
sp_v3.0_unigene6549 SustainPine v3.0 2477
• AutoFact: Mating_C domain containing protein 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zn-finger transcription factor 4.995e-15
Complete
sp_v3.0_unigene6560 SustainPine v3.0 1213
• AutoFact: Peroxidase-like protein (Fragment) n=14 Tax=Picea sitchensis RepID=E0Z9M2_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxidase 0.0
C-terminus
sp_v3.0_unigene6608 SustainPine v3.0 2999
• AutoFact: Lipoxygenase n=1 Tax=Ricinus communis RepID=B9RSQ2_RICCO 0.0
• FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
• Sma3: Lipoxygenase 0.0
Complete
sp_v3.0_unigene6623 SustainPine v3.0 1233
• AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative n=1 Tax=Ricinus communis RepID=B9S4K4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6628 SustainPine v3.0 1929
• AutoFact: putative leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] sp|Q9M0G7.1|PXL2_ARATH RecName: Full=Leucine-rich repeat receptor-like protein kinase PXL2; AltName: Full=Protein PHLOEM INTERCALATED WITH XYLEM-LIKE 2; Flags: Precursor emb| 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 7.589e-24
C-terminus
sp_v3.0_unigene6641 SustainPine v3.0 571
• AutoFact: ABC transporter I family member 20 [Arabidopsis thaliana] sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC transporter I family member 20; Short=ABC transporter ABCI.20; Short=AtABCI20; AltName: Full=GCN-related protein 3; AltName: Full=Non-intrinsic ABC protein 9.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene6665 SustainPine v3.0 1407
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ricinus communis RepID=B9T6J3_RICCO 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene6678 SustainPine v3.0 1908
• AutoFact: peroxidase 63 [Arabidopsis thaliana] sp|Q9FL16.1|PER63_ARATH RecName: Full=Peroxidase 63; Short=Atperox P63; AltName: Full=ATP26a; Flags: Precursor dbj|BAB10896.1| peroxidase ATP26a homolog [Arabidopsis thaliana] dbj|BAC43229.1| putative peroxidase ATP26a 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative peroxidase 1.218e-23
Complete
sp_v3.0_unigene6704 SustainPine v3.0 2494
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.075e-24
C-terminus
sp_v3.0_unigene6723 SustainPine v3.0 1477
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Type-a response regulator 2.982e-30
Complete
sp_v3.0_unigene6729 SustainPine v3.0 1578
• AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
• FL-Next: sp=ABC transporter I family member 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ABC transporter family protein 7.849e-06
Complete
sp_v3.0_unigene6785 SustainPine v3.0 1704
• AutoFact: Regulatory protein NPR1, putative n=1 Tax=Ricinus communis RepID=B9RK83_RICCO 0.0
• FL-Next: sp=Regulatory protein NPR2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: NPR1-like protein 4.234e-36
Putative N-terminus
sp_v3.0_unigene6801 SustainPine v3.0 959
• AutoFact: Maf protein-like protein n=2 Tax=Selaginella moellendorffii RepID=D8QY79_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6837 SustainPine v3.0 1255
• AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Picea glauca RepID=Q40846_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 8.141e-39
Putative C-terminus
sp_v3.0_unigene6852 SustainPine v3.0 872
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanine--tRNA ligase, chloroplastic; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene6864 SustainPine v3.0 1179
• AutoFact: Zinc finger CCCH domain-containing protein 20 n=2 Tax=Arabidopsis RepID=C3H20_ARATH 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Zn-finger transcription factor 4.501e-15
Internal
sp_v3.0_unigene6866 SustainPine v3.0 2090
• AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9IAQ7_POPTR 0.0
• FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: GRAS family transcription factor 3.862e-26
C-terminus
sp_v3.0_unigene6883 SustainPine v3.0 4003
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Serine/threonine protein kinase, putative 2.376e-07
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain