Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6060 SustainPine v3.0 1065
AutoFact: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [Arabidopsis thaliana] gb|AAG52266.1|AC019018_3 putative deoxyoctulonosic acid synthetase; 116195-114393 [Arabidopsis thaliana] emb|CAD43603.1| putative CMP-KDO synthetase [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene6140 SustainPine v3.0 3011
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-1, putative 6.528e-13
C-terminus
sp_v3.0_unigene6145 SustainPine v3.0 2382
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Skip-2, putative 1.854e-13
Complete
sp_v3.0_unigene6162 SustainPine v3.0 2459
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein arginine N-methyltransferase 1.082e-10
Complete
sp_v3.0_unigene6167 SustainPine v3.0 1637
AutoFact: Xyloglucan endotransglucosylase/hydrolase 2 n=1 Tax=Rosa x borboniana RepID=Q2MK81_9ROSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Xyloglucan endotransglycosylase 1.19797e-41
Complete
sp_v3.0_unigene6193 SustainPine v3.0 2999
AutoFact: dynamin like protein 2a [Arabidopsis thaliana] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Dynamin, putative 2.572e-10
Complete
sp_v3.0_unigene6206 SustainPine v3.0 2176
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 6.946e-06
Complete
sp_v3.0_unigene6228 SustainPine v3.0 2823
AutoFact: Receptor serine-threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RT11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Receptor serine-threonine protein kinase, putative 1.058e-31
Complete
sp_v3.0_unigene6237 SustainPine v3.0 1825
AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene6274 SustainPine v3.0 1545
AutoFact: 70 kDa heat shock protein n=5 Tax=BEP clade RepID=Q10SR3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
C-terminus
sp_v3.0_unigene6299 SustainPine v3.0 1933
AutoFact: raffinose synthase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Stachyose synthase 9.277e-22
Putative Complete
sp_v3.0_unigene6328 SustainPine v3.0 1489
AutoFact: L-lactate dehydrogenase n=1 Tax=Picea sitchensis RepID=D5AAB2_PICSI 0.0
FL-Next: sp=L-lactate dehydrogenase A; Hordeum vulgare (Barley). 0.0
Sma3: L-lactate dehydrogenase 0.0
Complete
sp_v3.0_unigene6353 SustainPine v3.0 1961
AutoFact: Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Picea sitchensis RepID=D5ACW3_PICSI 0.0
FL-Next: sp=Phosphoribosylformylglycinamidine cyclo-ligase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6355 SustainPine v3.0 2803
AutoFact: Lipoxygenase (Fragment) n=5 Tax=Vitis vinifera RepID=D7U236_VITVI 0.0
FL-Next: sp=Lipoxygenase; Taxus wallichiana var. chinensis (Chinese yew) (Taxus chinensis). 0.0
Sma3: Lipoxygenase 0.0
Putative Complete
sp_v3.0_unigene6406 SustainPine v3.0 3309
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene6439 SustainPine v3.0 1817
AutoFact: Pyrroline-5-carboxylate synthetase n=1 Tax=Gossypium arboreum RepID=B1A2U9_GOSAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pyrroline-5-carboxylate synthetase 3.169e-37
N-terminus
sp_v3.0_unigene6442 SustainPine v3.0 1812
AutoFact: Cationic peroxidase 1, putative n=1 Tax=Ricinus communis RepID=B9SWU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peroxidase 0.0
Complete
sp_v3.0_unigene6462 SustainPine v3.0 3213
AutoFact: aldehyde dehydrogenase [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aldehyde dehydrogenase 8.046e-39
Putative Complete
sp_v3.0_unigene6488 SustainPine v3.0 3647
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene6500 SustainPine v3.0 1100
AutoFact: Gibberellin receptor GID1-like protein n=2 Tax=Physcomitrella patens RepID=A9LY13_9BRYO 0.0
FL-Next: sp=Probable carboxylesterase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative GID1-like gibberellin receptor 4.605e-22
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain