Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5642 SustainPine v3.0 2023
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBD4_RICCO 0.0
FL-Next: sp=Bifunctional fucokinase/fucose pyrophosphorylase; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene5690 SustainPine v3.0 2414
AutoFact: galactokinase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Galactokinase 1.143e-18
Complete
sp_v3.0_unigene5699 SustainPine v3.0 2149
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 3.19e-08
Complete
sp_v3.0_unigene5700 SustainPine v3.0 3261
AutoFact: human Rev interacting-like protein-like [Oryza sativa Japonica Group] dbj|BAD25012.1| human Rev interacting-like protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: HIV-1 rev binding protein, hrbl, putative 2.032e-09
Putative Complete
sp_v3.0_unigene5707 SustainPine v3.0 1397
AutoFact: NAD(H) kinase 3 [Arabidopsis thaliana] sp|Q500Y9.1|NADHK_ARATH RecName: Full=NADH kinase; Short=AtNADK-3 gb|AAY27065.1| At1g78590 [Arabidopsis thaliana] gb|ACF28397.1| At1g78590 [Arabidopsis thaliana] gb|AEE36124.1| NAD(H) kinase 3 [Arabidopsis thaliana] 0.0
FL-Next: sp=NADH kinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: NADH kinase 1.283e-09
Complete
sp_v3.0_unigene5715 SustainPine v3.0 2679
AutoFact: putative cyclin-dependent kinase E1 [Arabidopsis thaliana] dbj|BAF00561.1| cdc2-like protein kinase like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Cdc2Pa protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Cyclin-dependent kinase 1.121e-13
Complete
sp_v3.0_unigene5741 SustainPine v3.0 3023
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 6.47e-16
Complete
sp_v3.0_unigene5747 SustainPine v3.0 5568
AutoFact: Phosphorylase n=1 Tax=Picea sitchensis RepID=A9NUV6_PICSI 0.0
FL-Next: sp=Phosphorylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphorylase 0.0
Complete
sp_v3.0_unigene5788 SustainPine v3.0 2740
AutoFact: threonyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_66, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5817 SustainPine v3.0 1488
AutoFact: Peroxidase 5 n=1 Tax=Vitis vinifera RepID=PER5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative peroxidase 7.95517e-42
Complete
sp_v3.0_unigene5861 SustainPine v3.0 1902
AutoFact: putative protein phosphatase 2C 52 [Arabidopsis thaliana] ref|NP_001190668.1| putative protein phosphatase 2C 52 [Arabidopsis thaliana] sp|Q8GY60.1|P2C52_ARATH RecName: Full=Probable protein phosphatase 2C 52; Short=AtPP2C52 dbj|BAC42488.1| unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase-2c, putative 2.362e-17
C-terminus
sp_v3.0_unigene5872 SustainPine v3.0 1981
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene5886 SustainPine v3.0 2243
AutoFact: phenylalanyl-tRNA synthetase beta chain [Arabidopsis thaliana] sp|Q9SGE9.1|SYFB_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gb|AAG51865.1|AC010926_28 putative pheny 0.0
FL-Next: sp=Probable phenylalanine--tRNA ligase beta subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr17 scaffold_16, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene5895 SustainPine v3.0 2477
AutoFact: TPA_inf: ARO1-like protein 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: ARO1-like protein 1 1.087e-16
Complete
sp_v3.0_unigene5902 SustainPine v3.0 1857
AutoFact: tRNA(Ile)-lysidine synthetase [Synechococcus sp. JA-3-3Ab] sp|Q2JRN8.1|TILS_SYNJA RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gb|ABD00708.1| tRNA(Ile)-lysidine s 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: tRNA(Ile)-lysidine synthase, chloroplastic 8.22e-15
Complete
sp_v3.0_unigene5905 SustainPine v3.0 791
AutoFact: putative methylase [Arabidopsis thaliana] gb|AAO64787.1| At4g28830 [Arabidopsis thaliana] dbj|BAE99501.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85551.1| putative methylase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5932 SustainPine v3.0 1823
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Squamosa promoter-binding protein, putative 6.291e-23
Complete
sp_v3.0_unigene5942 SustainPine v3.0 2589
AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
FL-Next: sp=Ethylene-responsive transcription factor 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.12706e-41
Complete
sp_v3.0_unigene6006 SustainPine v3.0 3170
AutoFact: actin bundling protein ABP135 [Lilium longiflorum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative villin 2.329e-12
C-terminus
sp_v3.0_unigene6008 SustainPine v3.0 1663
AutoFact: Cysteine synthase n=3 Tax=Oryza sativa RepID=Q5Z8Y9_ORYSJ 0.0
FL-Next: sp=Cysteine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cysteine synthase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain