Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5142 SustainPine v3.0 1232
AutoFact: Chaperone protein htpG family protein [Arabidopsis thaliana] gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14 [Arabidopsis thaliana] gb|AAD32922.1| putative heat shock protein [Arabidopsis thaliana] gb|AAK96633.1| At2g04030/F3C11.14 [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Sma3: Heat shock protein 90 0.0
Putative N-terminus
sp_v3.0_unigene5293 SustainPine v3.0 2584
AutoFact: serine/threonine protein phosphatase 2A regulatory subunit B prime beta isoform [Arabidopsis thaliana] sp|O04376.1|2A5B_ARATH RecName: Full=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Short=AtB' beta; Short=PP2A, B' 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Protein phosphatase 2a, regulatory subunit, putative 1.322e-21
Complete
sp_v3.0_unigene5310 SustainPine v3.0 3555
AutoFact: actin bundling protein ABP135 [Lilium longiflorum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative villin 2.253e-12
Complete
sp_v3.0_unigene5312 SustainPine v3.0 1758
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Double-stranded RNA binding protein 1.046e-16
Complete
sp_v3.0_unigene5324 SustainPine v3.0 2137
AutoFact: RecName: Full=Importin subunit alpha; AltName: Full=Karyopherin subunit alpha; Short=KAP alpha gb|AAC23722.1| importin alpha [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin alpha, putative 8.841e-18
Complete
sp_v3.0_unigene5348 SustainPine v3.0 3019
AutoFact: Importin-7, putative n=3 Tax=rosids RepID=B9SP38_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr5 scaffold_67, whole genome shotgun sequence 0.0
N-terminus
sp_v3.0_unigene5360 SustainPine v3.0 1873
AutoFact: sucrose-phosphatase 1 [Ginkgo biloba] 0.0
FL-Next: tr=Sucrose-phosphatase; Pinus taeda (Loblolly pine). 0.0
Sma3: Sucrose phosphate phosphatase 1.669e-22
Complete
sp_v3.0_unigene5362 SustainPine v3.0 4351
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Importin beta-3, putative 2.321e-08
Complete
sp_v3.0_unigene5367 SustainPine v3.0 3463
AutoFact: Valyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SWL0_RICCO 0.0
FL-Next: sp=Valine--tRNA ligase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Valyl-tRNA synthetase 1.747e-15
C-terminus
sp_v3.0_unigene5400 SustainPine v3.0 1924
AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5412 SustainPine v3.0 1508
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5434 SustainPine v3.0 1497
AutoFact: oxidoreductase, acting on the CH-CH group of donors 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5448 SustainPine v3.0 2679
AutoFact: mitogen-activated protein kinase kinase [Suaeda salsa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen-activated protein kinase kinase 1 2.77e-13
Complete
sp_v3.0_unigene5484 SustainPine v3.0 2879
AutoFact: RecName: Full=Protein arginine N-methyltransferase 5; AltName: Full=Shk1 kinase-binding protein 1 homolog 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein arginine N-methyltransferase 3.206e-11
Complete
sp_v3.0_unigene5514 SustainPine v3.0 2595
AutoFact: N-acetyl-glutamate synthase n=1 Tax=Solanum lycopersicum RepID=C4NFG1_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative amino acid acetyltransferase 5.451e-09
Complete
sp_v3.0_unigene5559 SustainPine v3.0 1970
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene5582 SustainPine v3.0 3130
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative cytosolic tRNA-Ala synthetase 3.385e-08
Putative Complete
sp_v3.0_unigene5588 SustainPine v3.0 2181
AutoFact: MYND type zinc finger and programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] gb|AAK59634.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAL07201.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE82142 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5597 SustainPine v3.0 1898
AutoFact: Peptidase M20/M25/M40 family protein [Arabidopsis thaliana] gb|AAL75900.1| AT4g38220/F20D10_340 [Arabidopsis thaliana] gb|AEE86894.1| Peptidase M20/M25/M40 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aminoacylase-1 1.134e-12
Complete
sp_v3.0_unigene5618 SustainPine v3.0 1464
AutoFact: Elongation factor P n=3 Tax=Andropogoneae RepID=B6TAH3_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain