Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4445 SustainPine v3.0 912
• AutoFact: Alcohol dehydrogenase n=1 Tax=Pinus pinaster RepID=F4MKM2_PINPS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alcohol dehydrogenase 4.797e-37
N-terminus
sp_v3.0_unigene4513 SustainPine v3.0 1077
• AutoFact: glycolipid transfer protein 1 [Arabidopsis thaliana] ref|NP_973588.1| glycolipid transfer protein 1 [Arabidopsis thaliana] gb|AAB80664.1| expressed protein [Arabidopsis thaliana] gb|AAM63096.1| unknown [Arabidopsis thaliana] gb|AAO42225.1| unknown protein 7.00005e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycolipid transfer protein, putative 4.49e-09
Putative Complete
sp_v3.0_unigene4559 SustainPine v3.0 267
• AutoFact: E-beta farnesene synthase n=1 Tax=Pinus sylvestris RepID=D7PCH9_PINSY 6.0e-25
• FL-Next: tr=E-beta farnesene synthase; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene4568 SustainPine v3.0 891
• AutoFact: Glycosyl hydrolase (Fragment) n=8 Tax=Picea RepID=F1C902_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative beta-1,3-glucanase 1.491e-36
C-terminus
sp_v3.0_unigene4569 SustainPine v3.0 477
• AutoFact: [O] COG5272 Ubiquitin 6.0e-36
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene4571 SustainPine v3.0 477
• AutoFact: Heat shock protein 90-1 n=9 Tax=rosids RepID=HS901_ARATH 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 90 5.182e-23
Putative C-terminus
sp_v3.0_unigene4593 SustainPine v3.0 368
• AutoFact: Low molecular weight heat-shock protein n=7 Tax=Pinaceae RepID=Q40935_PSEMZ 9.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat-shock protein, putative 2.584e-16
N-terminus
sp_v3.0_unigene4615 SustainPine v3.0 945
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
N-terminus
sp_v3.0_unigene4630 SustainPine v3.0 270
• AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 1.0e-27
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-adenosylmethionine synthetase 1.326e-21
Putative C-terminus
sp_v3.0_unigene4631 SustainPine v3.0 1082
• AutoFact: Lipoxygenase n=1 Tax=Sesbania rostrata RepID=Q93YA9_SESRO 0.0
• FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene4642 SustainPine v3.0 828
• AutoFact: putative GTPase activating protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ZAC 7.064e-13
N-terminus
sp_v3.0_unigene4647 SustainPine v3.0 624
• AutoFact: synaptosomal associated protein, putative; K08508 synaptosomal-associated protein, 23kDa 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Synaptosomal associated protein, putative 2.399e-09
C-terminus
sp_v3.0_unigene4671 SustainPine v3.0 277
• AutoFact: Aconitate hydratase (Fragment) n=8 Tax=Pinaceae RepID=E3V1P1_PINSY 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative aconitase 1.976e-14
Internal
sp_v3.0_unigene4677 SustainPine v3.0 623
• AutoFact: (-)-linalool-like synthase n=1 Tax=Picea sitchensis RepID=Q20HU8_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copalyl diphosphate synthase 9.006e-16
N-terminus
sp_v3.0_unigene4705 SustainPine v3.0 1204
• AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Methionine S-adenosyl transferase 2.202e-35
C-terminus
sp_v3.0_unigene4707 SustainPine v3.0 1253
• AutoFact: steroid 5alpha-reductase [Ipomoea nil] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4713 SustainPine v3.0 250
• AutoFact: ABC transporter I family member 20 [Arabidopsis thaliana] sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC transporter I family member 20; Short=ABC transporter ABCI.20; Short=AtABCI20; AltName: Full=GCN-related protein 3; AltName: Full=Non-intrinsic ABC protein 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene4746 SustainPine v3.0 517
• AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 4.935e-23
Putative C-terminus
sp_v3.0_unigene4757 SustainPine v3.0 964
• AutoFact: Heat Shock Factor 3 [Arabidopsis thaliana] 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene4786 SustainPine v3.0 3565
• AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
• FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain