Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene51366 SustainPine v3.0 244
• AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 9.0e-07
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene55062 SustainPine v3.0 383
• AutoFact: OSJNBa0020J04.2 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XUI0_ORYSJ 1.0e-07
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene61593 SustainPine v3.0 154
• AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q94I36_ORYSJ 5.0e-07
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64818 SustainPine v3.0 245
• AutoFact: OSJNBa0017P10.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7F9M4_ORYSJ 3.0e-08
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene65281 SustainPine v3.0 218
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q10GH3_ORYSJ 1.0e-15
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Putative C-terminus
sp_v3.0_unigene68566 SustainPine v3.0 334
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 6.0e-39
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.604e-18
Internal
sp_v3.0_unigene72734 SustainPine v3.0 323
• AutoFact: OSJNBa0032N05.6 protein n=1 Tax=Oryza sativa RepID=Q7XKP3_ORYSA 1.0e-16
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene132473 SustainPine v3.0 588
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 2.0e-25
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene132607 SustainPine v3.0 300
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y0A9_ORYSJ 3.0e-17
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.804e-23
Internal
sp_v3.0_unigene159544 SustainPine v3.0 442
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10RT1_ORYSJ 7.0e-28
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161039 SustainPine v3.0 314
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 2.0e-21
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Gag-Pol polyprotein 6.502e-11
Internal
sp_v3.0_unigene161385 SustainPine v3.0 340
• AutoFact: Putative retroelement n=1 Tax=Oryza sativa RepID=Q8S653_ORYSA 3.0e-15
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene162159 SustainPine v3.0 451
• AutoFact: Putative retroelement n=2 Tax=Oryza sativa RepID=Q8LLX4_ORYSJ 1.0e-10
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene164221 SustainPine v3.0 338
• AutoFact: Putative retroelement n=1 Tax=Oryza sativa RepID=Q8S6I8_ORYSA 5.0e-16
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene165003 SustainPine v3.0 159
• AutoFact: Putative retroelement n=2 Tax=Oryza sativa RepID=Q8H031_ORYSJ 2.0e-05
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain