Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene267 SustainPine v3.0 1747
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene2557 SustainPine v3.0 1809
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene3845 SustainPine v3.0 2713
AutoFact: Acyl_transf_3 multi-domain protein 6.0e-08
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene3846 SustainPine v3.0 2618
AutoFact: Aspartyl beta-hydroxylase N-terminal region domain-containing protein n=2 Tax=Arabidopsis thaliana RepID=Q9S9P0_ARATH 8.0e-15
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene18834 SustainPine v3.0 635
AutoFact: Androgen induced inhibitor of proliferation (As3) / pds5, putative n=1 Tax=Ricinus communis RepID=B9T579_RICCO 1.0e-16
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: cDNA clone:J023074F05, full insert sequence 9.26e-06
Internal
sp_v3.0_unigene25195 SustainPine v3.0 634
AutoFact: HEAT n=1 Tax=Medicago truncatula RepID=A2Q1R4_MEDTR 5.0e-22
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Gb|AAF07790.1 3.411e-06
Internal
sp_v3.0_unigene59542 SustainPine v3.0 266
AutoFact: DNA mismatch repair protein Msh6-1 n=3 Tax=Arabidopsis RepID=MSH6_ARATH 2.0e-32
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64754 SustainPine v3.0 170
AutoFact: putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] 4.0e-26
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene94740 SustainPine v3.0 510
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104452 SustainPine v3.0 233
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNF5_RICCO 3.0e-16
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene122465 SustainPine v3.0 303
AutoFact: DNA mismatch repair protein n=1 Tax=Petunia x hybrida RepID=Q6DQL6_PETHY 2.0e-13
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene123466 SustainPine v3.0 348
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 9.0e-18
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148374 SustainPine v3.0 297
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene157002 SustainPine v3.0 425
AutoFact: putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group] 8.0e-09
FL-Next: sp=DNA mismatch repair protein MSH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain