Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene138 SustainPine v3.0 3993
• AutoFact: putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 3.257e-20
Complete
sp_v3.0_unigene49930 SustainPine v3.0 292
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 1.0e-27
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal
sp_v3.0_unigene58287 SustainPine v3.0 439
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 9.0e-38
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 8.911e-17
Internal
sp_v3.0_unigene61182 SustainPine v3.0 170
• AutoFact: RNA-dependent RNA polymerase 2 n=2 Tax=Arabidopsis RepID=RDR2_ARATH 1.0e-14
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase 1.492e-20
Internal
sp_v3.0_unigene76244 SustainPine v3.0 353
• AutoFact: Putative RNA-dependent RNA polymerase RdRP2 n=1 Tax=Nicotiana benthamiana RepID=Q647I4_NICBE 7.0e-23
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene98279 SustainPine v3.0 403
• AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RB56_RICCO 6.0e-19
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene104041 SustainPine v3.0 495
• AutoFact: RNA-dependent RNA polymerase 2 [Arabidopsis thaliana] sp|O82504.1|RDR2_ARATH RecName: Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2; AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1; AltName: Full=RNA-directed RNA polymerase 2 gb|AAC35535.1| simi 5.0e-20
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene111538 SustainPine v3.0 266
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 6.0e-25
• FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: RNA-directed RNA polymerase, putative 2.497e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain