Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene147886 SustainPine v3.0 374
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QSI5_ORYSJ 2.0e-08
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene147896 SustainPine v3.0 240
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2G1_ORYSJ 3.0e-13
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene148089 SustainPine v3.0 227
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTQ7_ORYSJ 1.0e-13
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene148243 SustainPine v3.0 315
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R4N0_ORYSJ 3.0e-15
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene148273 SustainPine v3.0 489
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QSI5_ORYSJ 4.0e-15
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene148491 SustainPine v3.0 215
• AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 4.0e-25
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene148859 SustainPine v3.0 422
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53MN4_ORYSJ 2.0e-15
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Putative Complete
sp_v3.0_unigene149278 SustainPine v3.0 246
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53N21_ORYSJ 5.0e-06
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149352 SustainPine v3.0 188
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R0F6_ORYSJ 1.0e-12
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149683 SustainPine v3.0 253
• AutoFact: Retrotransposon protein, putative, unclassified n=3 Tax=Oryza sativa Japonica Group RepID=Q2QZI0_ORYSJ 8.0e-06
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149920 SustainPine v3.0 146
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-10
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene154368 SustainPine v3.0 248
• AutoFact: OSJNBa0011K22.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XLB6_ORYSJ 9.0e-15
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene156799 SustainPine v3.0 296
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q53MA1_ORYSJ 4.0e-08
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene159585 SustainPine v3.0 105
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q65WZ9_ORYSJ 2.0e-05
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene159610 SustainPine v3.0 543
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza RepID=Q2R233_ORYSJ 1.0e-24
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Integrase 4.041e-08
Internal
sp_v3.0_unigene159647 SustainPine v3.0 192
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NJ3_ORYSJ 8.0e-12
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 3.081e-24
Internal
sp_v3.0_unigene159791 SustainPine v3.0 419
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZN1_ORYSJ 2.0e-07
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene160296 SustainPine v3.0 443
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 4.0e-35
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Reverse transcriptase 2.066e-09
Internal
sp_v3.0_unigene161246 SustainPine v3.0 267
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 3.0e-09
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene161936 SustainPine v3.0 384
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 8.0e-14
• FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain