Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene56473 SustainPine v3.0 381
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QVH8_ORYSJ 6.0e-22
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene56833 SustainPine v3.0 431
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QUU8_ORYSJ 4.0e-29
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: OSIGBa0160I04.5 protein 6.335e-06
Internal
sp_v3.0_unigene57083 SustainPine v3.0 281
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R3G0_ORYSJ 5.0e-14
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.252e-12
Internal
sp_v3.0_unigene57276 SustainPine v3.0 219
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q2R4I0_ORYSJ 2.0e-07
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene57380 SustainPine v3.0 270
AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 5.0e-31
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene57625 SustainPine v3.0 293
AutoFact: Putative retroelement n=2 Tax=Oryza sativa Japonica Group RepID=Q8LMT3_ORYSJ 2.0e-05
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene57842 SustainPine v3.0 392
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10G21_ORYSJ 5.0e-06
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene59214 SustainPine v3.0 334
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 4.0e-15
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene59318 SustainPine v3.0 322
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTB8_ORYSJ 3.0e-15
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene59439 SustainPine v3.0 245
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-08
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene59809 SustainPine v3.0 239
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53MN2_ORYSJ 7.0e-08
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene60000 SustainPine v3.0 260
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 8.0e-09
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene60269 SustainPine v3.0 193
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R2G1_ORYSJ 1.0e-10
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene60320 SustainPine v3.0 139
AutoFact: Unassigned protein
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene60355 SustainPine v3.0 366
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R264_ORYSJ 2.0e-07
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene60455 SustainPine v3.0 261
AutoFact: Putative retroelement n=1 Tax=Oryza sativa Japonica Group RepID=Q94I37_ORYSJ 2.0e-06
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene62345 SustainPine v3.0 318
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NA3_ORYSJ 2.0e-14
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene62746 SustainPine v3.0 328
AutoFact: OSJNBa0087O24.13 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XPJ7_ORYSJ 5.0e-25
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 2.225e-08
Internal
sp_v3.0_unigene62864 SustainPine v3.0 227
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa Japonica Group RepID=Q10HG0_ORYSJ 6.0e-07
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene63124 SustainPine v3.0 227
AutoFact: integrase [Oryza officinalis] 1.0e-14
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain