Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Chromatin remodeling complex subunit; subsp. trichocarpa).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1424 SustainPine v3.0 913
• AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S832_PHYPA 5.0e-19
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
• Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 3.006e-09
Internal
sp_v3.0_unigene12163 SustainPine v3.0 1012
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GVF7_POPTR 1.0e-26
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene29377 SustainPine v3.0 2867
• AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
• Sma3: SWIRM domain containing protein, expressed 2.796e-09
Complete
sp_v3.0_unigene52615 SustainPine v3.0 228
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GF82_POPTR 5.0e-05
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene57780 SustainPine v3.0 124
• AutoFact: Unassigned protein
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene73875 SustainPine v3.0 80
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HVN6_POPTR 7.0e-05
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene78426 SustainPine v3.0 102
• AutoFact: Chromatin remodeling complex subunit n=3 Tax=Populus trichocarpa RepID=B9HM77_POPTR 7.0e-08
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene128483 SustainPine v3.0 441
• AutoFact: T7A14.1 protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9ZVP6_ARATH 4.0e-08
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene131674 SustainPine v3.0 440
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 4.0e-35
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene148784 SustainPine v3.0 320
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-09
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene148935 SustainPine v3.0 301
• AutoFact: SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U2Y8_PHYPA 1.0e-10
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene167491 SustainPine v3.0 122
• AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SBN6_RICCO 3.0e-09
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
• Sma3: SWR1 complex protein, SNF2 family DNA-dependent ATPase 1.463e-09
Internal
sp_v3.0_unigene199563 SustainPine v3.0 292
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GF82_POPTR 4.0e-21
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain