Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene33172 SustainPine v3.0 4929
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene53939 SustainPine v3.0 189
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 3.0e-07
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene64288 SustainPine v3.0 271
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRQ3_RICCO 2.0e-10
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene80301 SustainPine v3.0 149
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 1.0e-09
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene103872 SustainPine v3.0 492
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 6.0e-34
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene148769 SustainPine v3.0 240
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRQ3_RICCO 3.0e-28
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene152771 SustainPine v3.0 450
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 1.0e-08
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene153882 SustainPine v3.0 312
• AutoFact: E3 ubiquitin-protein ligase RNF123 [Bos taurus] ref|XP_002697083.1| PREDICTED: ring finger protein 123-like [Bos taurus] gb|DAA17022.1| ring finger protein 123-like [Bos taurus] 3.0e-05
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene157991 SustainPine v3.0 448
• AutoFact: ubiquitination-promoting complex protein 1 [Arabidopsis thaliana] sp|Q9SIZ8.2|RKP_ARATH RecName: Full=E3 ubiquitin-protein ligase RKP; Short=AtKPC1; AltName: Full=Protein RELATED TO KPC1 gb|AEC07251.1| ubiquitination-promoting complex protein 1 [Arabidops 5.0e-11
• FL-Next: sp=E3 ubiquitin-protein ligase RKP; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain