Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Putative retrotransposon protein; Phyllostachys edulis.

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene12099 SustainPine v3.0 1083
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVH7_9POAL 4.0e-08
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Putative N-terminus
sp_v3.0_unigene51662 SustainPine v3.0 447
AutoFact: rve domain containing protein 3.0e-13
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.27518e-43
Internal
sp_v3.0_unigene52207 SustainPine v3.0 390
AutoFact: Polynucleotidyl transferase, Ribonuclease H fold (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q4N7_MEDTR 5.0e-32
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.62428e-44
Internal
sp_v3.0_unigene53707 SustainPine v3.0 351
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVG4_9POAL 3.0e-19
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene53969 SustainPine v3.0 279
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 6.0e-13
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Pol protein integrase region 1.674e-33
Internal
sp_v3.0_unigene54015 SustainPine v3.0 255
AutoFact: Pol protein integrase region (Fragment) n=6 Tax=Spermatophyta RepID=Q9M6N3_9CONI 3.0e-18
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Pol protein integrase region 0.0
Internal
sp_v3.0_unigene55294 SustainPine v3.0 203
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 1.0e-16
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.022e-07
Internal
sp_v3.0_unigene55601 SustainPine v3.0 455
AutoFact: Unassigned protein
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene55603 SustainPine v3.0 87
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q7Y1L5_ORYSJ 9.0e-07
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene56585 SustainPine v3.0 208
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVQ8_9POAL 3.0e-07
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene56727 SustainPine v3.0 284
AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ 3.0e-17
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene57982 SustainPine v3.0 338
AutoFact: Putative 22 kDa kafirin cluster; Ty3-Gypsy type n=2 Tax=Oryza sativa RepID=Q7G6A5_ORYSJ 2.0e-22
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.209e-11
Internal
sp_v3.0_unigene58447 SustainPine v3.0 396
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 2.0e-23
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene58599 SustainPine v3.0 306
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QZS5_ORYSJ 6.0e-17
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene60470 SustainPine v3.0 163
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVG4_9POAL 3.0e-07
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene64919 SustainPine v3.0 265
AutoFact: Unassigned protein
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene69953 SustainPine v3.0 455
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 6.0e-29
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene70098 SustainPine v3.0 404
AutoFact: Unassigned protein
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene71005 SustainPine v3.0 348
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 8.0e-27
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 0.0
Internal
sp_v3.0_unigene71516 SustainPine v3.0 185
AutoFact: Unassigned protein
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain