Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Putative retrotransposon protein; Phyllostachys edulis.

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene72083 SustainPine v3.0 241
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVL5_9POAL 2.0e-13
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene77560 SustainPine v3.0 304
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 8.0e-07
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene109021 SustainPine v3.0 279
• AutoFact: Os08g0164800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0J7S9_ORYSJ 7.0e-12
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Putative C-terminus
sp_v3.0_unigene110744 SustainPine v3.0 358
• AutoFact: Unassigned protein
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene111571 SustainPine v3.0 198
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVS7_9POAL 2.0e-06
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene125685 SustainPine v3.0 282
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVG4_9POAL 8.0e-14
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene135248 SustainPine v3.0 247
• AutoFact: RVT_1 domain containing protein 6.0e-06
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Polyprotein 4.823e-06
Internal
sp_v3.0_unigene138608 SustainPine v3.0 215
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 1.0e-07
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene138955 SustainPine v3.0 332
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUN3_ORYSJ 5.0e-23
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 1.308e-08
Internal
sp_v3.0_unigene139493 SustainPine v3.0 301
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVL5_9POAL 2.0e-14
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene148358 SustainPine v3.0 226
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 5.0e-22
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 4.839e-13
Internal
sp_v3.0_unigene148461 SustainPine v3.0 580
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 9.94922e-44
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Putative retroelement 2.093e-06
Internal
sp_v3.0_unigene149334 SustainPine v3.0 274
• AutoFact: Unassigned protein
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene149831 SustainPine v3.0 455
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 1.0e-32
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene160138 SustainPine v3.0 381
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVG4_9POAL 6.0e-20
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene161145 SustainPine v3.0 369
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 6.0e-28
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene161287 SustainPine v3.0 146
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NJ3_ORYSJ 6.0e-05
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene161459 SustainPine v3.0 359
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVG4_9POAL 1.0e-16
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Internal
sp_v3.0_unigene161669 SustainPine v3.0 325
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 1.0e-16
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Pol protein integrase region 4.075e-17
Putative C-terminus
sp_v3.0_unigene162096 SustainPine v3.0 127
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVQ8_9POAL 9.0e-09
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Sma3: Pol protein integrase region 2.149e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain