Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene164339 SustainPine v3.0 256
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Copia-type polyprotein 6.773e-09
Internal
sp_v3.0_unigene164501 SustainPine v3.0 250
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
N-terminus
sp_v3.0_unigene164563 SustainPine v3.0 211
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-09
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene164611 SustainPine v3.0 276
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 3.0e-16
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene164618 SustainPine v3.0 376
AutoFact: Pupative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q75IL9_ORYSJ 3.0e-16
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene164674 SustainPine v3.0 290
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 5.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene164844 SustainPine v3.0 256
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene164934 SustainPine v3.0 323
AutoFact: Unassigned protein 5.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene164956 SustainPine v3.0 194
AutoFact: PREDICTED: copia protein-like n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE983F 5.0e-06
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene164996 SustainPine v3.0 194
AutoFact: PREDICTED: similar to copia-type polyprotein, putative n=1 Tax=Nasonia vitripennis RepID=UPI00015B481A 6.0e-09
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene165018 SustainPine v3.0 229
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene165103 SustainPine v3.0 266
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene165183 SustainPine v3.0 203
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene165432 SustainPine v3.0 457
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 8.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene165587 SustainPine v3.0 408
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene165999 SustainPine v3.0 186
AutoFact: Unassigned protein 3.0e-08
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene166071 SustainPine v3.0 377
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene166279 SustainPine v3.0 220
AutoFact: PREDICTED: similar to Copia protein (Gag-int-pol protein) n=1 Tax=Tribolium castaneum RepID=UPI000175862A 2.0e-12
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene166442 SustainPine v3.0 373
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene166891 SustainPine v3.0 143
AutoFact: Unassigned protein 2.0e-05
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain