Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene42894 SustainPine v3.0 549
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 6.0e-17
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene43094 SustainPine v3.0 226
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 1.0e-07
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
N-terminus
sp_v3.0_unigene44259 SustainPine v3.0 661
AutoFact: Unassigned protein 8.0e-24
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
N-terminus
sp_v3.0_unigene44946 SustainPine v3.0 399
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene45183 SustainPine v3.0 228
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 6.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative gag-pol polyprotein 2.693e-06
C-terminus
sp_v3.0_unigene45602 SustainPine v3.0 272
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QW16_ORYSJ 7.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene45679 SustainPine v3.0 177
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 8.0e-09
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene45953 SustainPine v3.0 1014
AutoFact: PREDICTED: copia protein-like n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE983F 2.0e-12
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative N-terminus
sp_v3.0_unigene46060 SustainPine v3.0 522
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 1.0e-20
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene46961 SustainPine v3.0 142
AutoFact: PREDICTED: copia protein-like n=2 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE83B1 9.0e-07
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene47705 SustainPine v3.0 1684
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 6.0e-08
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene48024 SustainPine v3.0 1140
AutoFact: Pupative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q75IL9_ORYSJ 3.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene48511 SustainPine v3.0 480
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 3.0e-21
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Retrotransposon protein, putative, unclassified 2.506e-07
C-terminus
sp_v3.0_unigene49659 SustainPine v3.0 866
AutoFact: Os10g0130700 protein n=2 Tax=Oryza sativa RepID=Q8L4X0_ORYSJ 6.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene50018 SustainPine v3.0 390
AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 4.0e-07
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene50857 SustainPine v3.0 432
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 2.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Copia-type polyprotein 1.462e-06
C-terminus
sp_v3.0_unigene51018 SustainPine v3.0 216
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q338J6_ORYSJ 5.0e-13
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene51572 SustainPine v3.0 548
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 4.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene51573 SustainPine v3.0 309
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Putative gag-pol polyprotein 3.176e-06
C-terminus
sp_v3.0_unigene51718 SustainPine v3.0 248
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Liriodendron tulipifera RepID=Q06294_LIRTU 6.0e-07
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain