Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene159726 SustainPine v3.0 496
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-40
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.392e-06
Internal
sp_v3.0_unigene159814 SustainPine v3.0 290
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 2.0e-18
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene159856 SustainPine v3.0 191
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene159877 SustainPine v3.0 468
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2R0F6_ORYSJ 3.0e-18
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene159979 SustainPine v3.0 450
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 5.0e-19
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene159980 SustainPine v3.0 357
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 2.0e-12
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene159994 SustainPine v3.0 95
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene160125 SustainPine v3.0 485
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 4.0e-21
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Tpv2-1c protein 8.285e-06
C-terminus
sp_v3.0_unigene160140 SustainPine v3.0 383
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 4.0e-22
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160262 SustainPine v3.0 439
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160263 SustainPine v3.0 412
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 8.0e-24
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160307 SustainPine v3.0 473
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 7.0e-16
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene160327 SustainPine v3.0 470
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 6.0e-15
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160352 SustainPine v3.0 415
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene160366 SustainPine v3.0 343
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-16
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160425 SustainPine v3.0 215
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 1.0e-07
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
N-terminus
sp_v3.0_unigene160545 SustainPine v3.0 355
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160602 SustainPine v3.0 373
• AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 5.0e-15
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
C-terminus
sp_v3.0_unigene160676 SustainPine v3.0 357
• AutoFact: zf-CCHC domain containing protein 0.0001
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene160695 SustainPine v3.0 239
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-15
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain