Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene205264 SustainPine v3.0 483
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 5.0e-29
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene205301 SustainPine v3.0 375
AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QYR6_ORYSJ 1.0e-09
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene205318 SustainPine v3.0 532
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 2.0e-23
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene205375 SustainPine v3.0 681
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 3.00004e-41
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 1.122e-08
Putative C-terminus
sp_v3.0_unigene206299 SustainPine v3.0 796
AutoFact: PREDICTED: similar to pol polyprotein, partial n=1 Tax=Nasonia vitripennis RepID=UPI00015B4525 3.0e-12
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus
sp_v3.0_unigene207246 SustainPine v3.0 532
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 3.0e-39
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.779e-13
C-terminus
sp_v3.0_unigene207318 SustainPine v3.0 522
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 3.0e-21
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia protein 1.949e-06
Putative C-terminus
sp_v3.0_unigene207334 SustainPine v3.0 699
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.475e-29
Putative C-terminus
sp_v3.0_unigene207390 SustainPine v3.0 722
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.55e-11
Putative C-terminus
sp_v3.0_unigene207394 SustainPine v3.0 450
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q338J6_ORYSJ 1.0e-30
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.169e-12
Putative C-terminus
sp_v3.0_unigene207411 SustainPine v3.0 277
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 6.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene207497 SustainPine v3.0 515
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 4.0e-27
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene207552 SustainPine v3.0 434
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 1.0e-28
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene208916 SustainPine v3.0 413
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 2.0e-06
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene209461 SustainPine v3.0 1047
AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q0PY40_SOLLC 2.0e-12
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain