|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene80406
|
SustainPine v3.0
|
358
|
|
• AutoFact: copia-type polyprotein, putative [Arabidopsis thaliana]
|
5.0e-11
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene80984
|
SustainPine v3.0
|
291
|
|
• AutoFact: similar to Copia protein (Gag-int-pol protein)
|
6.0e-19
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene94986
|
SustainPine v3.0
|
597
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
9.99967e-42
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
2.1e-11
|
|
C-terminus
|
|
sp_v3.0_unigene96237
|
SustainPine v3.0
|
654
|
|
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
5.953e-18
|
|
Internal
|
|
sp_v3.0_unigene97302
|
SustainPine v3.0
|
266
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene98630
|
SustainPine v3.0
|
680
|
|
• AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ
|
9.0e-35
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass
|
9.741e-07
|
|
C-terminus
|
|
sp_v3.0_unigene98790
|
SustainPine v3.0
|
425
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene98944
|
SustainPine v3.0
|
360
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
5.0e-23
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene99350
|
SustainPine v3.0
|
311
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
1.0e-10
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene102740
|
SustainPine v3.0
|
419
|
|
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH
|
8.0e-17
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene103047
|
SustainPine v3.0
|
580
|
|
• AutoFact: PREDICTED: similar to copia-like retrotransposable element n=1 Tax=Nasonia vitripennis RepID=UPI00015B472C
|
4.0e-21
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Putative N-terminus
|
|
sp_v3.0_unigene103202
|
SustainPine v3.0
|
275
|
|
• AutoFact: RVT_2 domain containing protein
|
3.0e-05
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene104817
|
SustainPine v3.0
|
410
|
|
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN
|
3.0e-33
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Retrotransposon protein, putative, unclassified
|
9.846e-11
|
|
Putative C-terminus
|
|
sp_v3.0_unigene105984
|
SustainPine v3.0
|
371
|
|
• AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Transposon protein, putative, unclassified
|
2.05e-07
|
|
Internal
|
|
sp_v3.0_unigene107195
|
SustainPine v3.0
|
343
|
|
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME
|
2.0e-29
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
7.689e-12
|
|
Internal
|
|
sp_v3.0_unigene107316
|
SustainPine v3.0
|
506
|
|
• AutoFact: copia-type polyprotein [Arabidopsis thaliana]
|
3.0e-25
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Putative C-terminus
|
|
sp_v3.0_unigene107490
|
SustainPine v3.0
|
273
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Putative N-terminus
|
|
sp_v3.0_unigene108465
|
SustainPine v3.0
|
569
|
|
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH
|
5.0e-37
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Sma3: Copia-type polyprotein
|
8.05e-11
|
|
Putative C-terminus
|
|
sp_v3.0_unigene109216
|
SustainPine v3.0
|
496
|
|
• AutoFact: B0809H07.1 protein n=1 Tax=Oryza sativa RepID=Q01JX9_ORYSA
|
5.0e-34
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene111970
|
SustainPine v3.0
|
260
|
|
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Sciadopitys verticillata RepID=Q4JQ38_SCIVE
|
1.0e-15
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
Internal
|
