Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene70075 SustainPine v3.0 449
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 5.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 6.678e-18
Internal
sp_v3.0_unigene70096 SustainPine v3.0 199
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 3.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene70249 SustainPine v3.0 459
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 2.609e-07
Putative C-terminus
sp_v3.0_unigene70293 SustainPine v3.0 412
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 8.0e-38
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.175e-14
C-terminus
sp_v3.0_unigene70491 SustainPine v3.0 346
AutoFact: Os07g0528100 protein (Fragment) n=3 Tax=Oryza sativa Japonica Group RepID=Q0D5X2_ORYSJ 4.0e-19
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene70539 SustainPine v3.0 260
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene70622 SustainPine v3.0 345
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus thunbergii RepID=Q9ZRK1_PINTH 1.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene70647 SustainPine v3.0 357
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene71124 SustainPine v3.0 338
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 7.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene71247 SustainPine v3.0 293
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.0e-22
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.822e-20
Internal
sp_v3.0_unigene71303 SustainPine v3.0 382
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 5.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Gag-Pol polyprotein 7.851e-09
Internal
sp_v3.0_unigene71464 SustainPine v3.0 245
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene71467 SustainPine v3.0 301
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q60EN1_ORYSJ 5.0e-05
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene71519 SustainPine v3.0 315
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 7.0e-16
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
C-terminus
sp_v3.0_unigene71561 SustainPine v3.0 352
AutoFact: putative retroelement pol polyprotein [Arabidopsis thaliana] 6.0e-18
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 8.793e-07
Internal
sp_v3.0_unigene71596 SustainPine v3.0 356
AutoFact: Putative retroelement n=2 Tax=Oryza sativa RepID=Q8H8K3_ORYSJ 4.0e-39
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.487e-38
C-terminus
sp_v3.0_unigene71686 SustainPine v3.0 288
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene71761 SustainPine v3.0 113
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus thunbergii RepID=Q9ZRK1_PINTH 5.0e-09
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Reverse transcriptase 7.173e-08
Internal
sp_v3.0_unigene71859 SustainPine v3.0 221
AutoFact: Pol polyprotein n=1 Tax=Citrus x paradisi RepID=Q94FM1_CITPA 5.0e-10
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene72062 SustainPine v3.0 251
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 4.0e-12
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain