Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: tr=Polyubiquitin; Pinus sylvestris (Scots pine).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene132695 SustainPine v3.0 275
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-30
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene138484 SustainPine v3.0 290
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-33
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 9.465e-08
N-terminus
sp_v3.0_unigene147195 SustainPine v3.0 786
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.829e-08
Putative Complete
sp_v3.0_unigene147406 SustainPine v3.0 264
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-29
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 1.737e-07
Putative N-terminus
sp_v3.0_unigene147534 SustainPine v3.0 996
AutoFact: polyubiquitin 4 UBQ4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.649e-08
Putative Complete
sp_v3.0_unigene147546 SustainPine v3.0 636
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.687e-08
Putative Complete
sp_v3.0_unigene147550 SustainPine v3.0 736
AutoFact: putative polyubiquitin (UBQ10) [Arabidopsis thaliana] 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Putative N-terminus
sp_v3.0_unigene147559 SustainPine v3.0 350
AutoFact: polyubiquitin [Pinus sylvestris] 7.0e-32
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene147561 SustainPine v3.0 694
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Putative N-terminus
sp_v3.0_unigene147575 SustainPine v3.0 329
AutoFact: polyubiquitin [Pinus sylvestris] 3.0e-30
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin, putative 4.476e-07
N-terminus
sp_v3.0_unigene147583 SustainPine v3.0 341
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene147598 SustainPine v3.0 553
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 1.014e-07
Putative Complete
sp_v3.0_unigene147599 SustainPine v3.0 863
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.687e-08
Putative Complete
sp_v3.0_unigene147604 SustainPine v3.0 579
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Polyubiquitin 2.167e-10
C-terminus
sp_v3.0_unigene147611 SustainPine v3.0 406
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.725e-08
Putative Complete
sp_v3.0_unigene147637 SustainPine v3.0 717
AutoFact: Ubiquitin (Ribosomal protein L40), putative n=1 Tax=Schistosoma mansoni RepID=C4Q9U2_SCHMA 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Bi-ubiquitin 1.637e-08
C-terminus
sp_v3.0_unigene147644 SustainPine v3.0 383
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene150493 SustainPine v3.0 203
AutoFact: Polyubiquitin 5 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BYC3_9EUKA 9.0e-24
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Sma3: Ubiquitin 1.963e-07
Putative C-terminus
sp_v3.0_unigene153365 SustainPine v3.0 258
AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 2.0e-13
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene208166 SustainPine v3.0 123
AutoFact: ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVU8_MSEPV 1.0e-11
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain