Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1025 SustainPine v3.0 1716
• AutoFact: DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative n=1 Tax=Ricinus communis RepID=B9S9D8_RICCO 7.0e-38
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene7430 SustainPine v3.0 1183
• AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene9328 SustainPine v3.0 1868
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Putative RNA polymerase II subunit 5 0.0
Complete
sp_v3.0_unigene19634 SustainPine v3.0 425
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 2.0e-07
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene26198 SustainPine v3.0 303
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 4.0e-24
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: RNA polymerase II subunit B7 1.214e-09
N-terminus
sp_v3.0_unigene31304 SustainPine v3.0 335
• AutoFact: DNA-directed RNA polymerase II subunit rpb7 n=1 Tax=Dictyostelium discoideum RepID=RPB7_DICDI 1.0e-27
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: RNA polymerase II subunit B7 2.544e-09
C-terminus
sp_v3.0_unigene36409 SustainPine v3.0 534
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 3.0e-07
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene71602 SustainPine v3.0 190
• AutoFact: DNA-directed RNA polymerase II subunit RPB7 n=10 Tax=Eumetazoa RepID=RPB7_HUMAN 2.0e-19
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene130367 SustainPine v3.0 504
• AutoFact: [K] COG1095 DNA-directed RNA polymerase, subunit E' 1.0e-06
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Putative C-terminus
sp_v3.0_unigene152014 SustainPine v3.0 549
• AutoFact: DNAdirected RNA polymerase II 19 kDa polypeptide pu n=2 Tax=Oomycetes RepID=F0WFZ2_9STRA 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: RNA polymerase II subunit B7 1.86e-09
C-terminus
sp_v3.0_unigene153206 SustainPine v3.0 435
• AutoFact: Polymerase n=3 Tax=Chromadorea RepID=E1FRC1_LOALO 9.80909e-45
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: RNA polymerase II subunit B7 1.577e-09
N-terminus
sp_v3.0_unigene156015 SustainPine v3.0 241
• AutoFact: PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like n=1 Tax=Monodelphis domestica RepID=UPI00020F6F8D 1.0e-14
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene156573 SustainPine v3.0 235
• AutoFact: DNA-directed RNA polymerase subunit E' (ISS) n=2 Tax=Ostreococcus RepID=Q00ZY7_OSTTA 4.0e-10
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene157458 SustainPine v3.0 333
• AutoFact: Putative DNA-directed RNA polymerase II chain Rpb7 n=1 Tax=Metarhizium acridum CQMa 102 RepID=E9E2Q1_METAQ 2.0e-32
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene166798 SustainPine v3.0 358
• AutoFact: DNA-directed RNA polymerase II subunit [Coprinopsis cinerea okayama7#130] gb|EAU91761.1| DNA-directed RNA polymerase II subunit [Coprinopsis cinerea okayama7#130] 1.0e-29
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
C-terminus
sp_v3.0_unigene189060 SustainPine v3.0 681
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 5.0e-07
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain