Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3726 SustainPine v3.0 2584
AutoFact: cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_849835.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_001031215.1| cleavage and polyadenylation specificity factor subu 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10752 SustainPine v3.0 1260
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr12 scaffold_78, whole genome shotgun sequence 1.805e-08
N-terminus
sp_v3.0_unigene12820 SustainPine v3.0 657
AutoFact: cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_849835.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_001031215.1| cleavage and polyadenylation specificity factor subu 0.0001
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene18871 SustainPine v3.0 836
AutoFact: cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_849835.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_001031215.1| cleavage and polyadenylation specificity factor subu 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene77732 SustainPine v3.0 253
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 1.0e-38
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr12 scaffold_78, whole genome shotgun sequence 7.327e-06
Internal
sp_v3.0_unigene80752 SustainPine v3.0 245
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 8.0e-25
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102312 SustainPine v3.0 1287
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome chr12 scaffold_78, whole genome shotgun sequence 3.733e-08
N-terminus
sp_v3.0_unigene115757 SustainPine v3.0 478
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene141761 SustainPine v3.0 284
AutoFact: Cleavage and polyadenylation specificity factor subunit 3-I n=2 Tax=Arabidopsis RepID=CPSF3_ARATH 8.0e-17
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene153001 SustainPine v3.0 475
AutoFact: cleavage and polyadenylation specificity factor 3 [Xenopus (Silurana) tropicalis] gb|AAH75564.1| cleavage and polyadenylation specific factor 3, 73kDa [Xenopus (Silurana) tropicalis] 1.0e-06
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene161771 SustainPine v3.0 352
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 7.0e-16
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162314 SustainPine v3.0 359
AutoFact: Endoribonuclease YSH1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SKF1_VERA1 4.0e-20
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene185724 SustainPine v3.0 375
AutoFact: Cleavage and polyadenylation specificity factor, 73 kDa subunit n=2 Tax=Andropogoneae RepID=B6U1D4_MAIZE 1.0e-19
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative cleavage and polyadenylation specificity factor 73 kDa subunit 5.848e-06
Putative C-terminus
sp_v3.0_unigene209610 SustainPine v3.0 391
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 1.0e-08
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene210207 SustainPine v3.0 655
AutoFact: cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_849835.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_001031215.1| cleavage and polyadenylation specificity factor subu 2.0e-09
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Os03g0852900 protein 7.797e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain