Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Histone H2A; Pinus pinaster (Maritime pine).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17569 SustainPine v3.0 1220
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 0.0
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene23768 SustainPine v3.0 871
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 4.2039e-45
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene25610 SustainPine v3.0 541
AutoFact: PREDICTED: histone cluster 1, H4m n=1 Tax=Rattus norvegicus RepID=UPI0001CF3AFE 2.0e-33
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene39544 SustainPine v3.0 146
AutoFact: Histone H2A n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q409_MALGO 0.0001
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene66731 SustainPine v3.0 399
AutoFact: Histone H2A n=1 Tax=Oryza sativa Japonica Group RepID=B9GDH1_ORYSJ 4.0e-09
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene70839 SustainPine v3.0 243
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 7.0e-10
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 3.979e-33
N-terminus
sp_v3.0_unigene71612 SustainPine v3.0 170
AutoFact: Histone H2A n=2 Tax=Chlamydomonadales RepID=A8HRZ9_CHLRE 4.0e-15
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Internal
sp_v3.0_unigene72183 SustainPine v3.0 139
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.0e-08
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 9.364e-21
Internal
sp_v3.0_unigene127596 SustainPine v3.0 646
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 4.00001e-41
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene143382 SustainPine v3.0 262
AutoFact: PREDICTED: similar to H2A histone family, member Z isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03C9 1.0e-12
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene153834 SustainPine v3.0 222
AutoFact: [B] COG5262 Histone H2A 1.0e-18
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene157585 SustainPine v3.0 514
AutoFact: Histone H2A n=3 Tax=Monosiga brevicollis RepID=A9USP1_MONBE 9.80909e-45
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Sma3: Histone H2A 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain