Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Expressed protein; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1297 SustainPine v3.0 2423
AutoFact: SMC_N multi-domain protein 2.0e-06
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene6760 SustainPine v3.0 1170
AutoFact: Med19 domain containing protein 4.0e-05
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene8118 SustainPine v3.0 1616
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] ref|NP_849545.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] dbj|BAC43394.1| unknown protein [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene13053 SustainPine v3.0 414
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene15349 SustainPine v3.0 444
AutoFact: pfam10644, Misat_Myo_SegII, Misato Segment II myosin-like domain 7.0e-22
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene35127 SustainPine v3.0 559
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene51061 SustainPine v3.0 132
AutoFact: MSC domain containing protein 1.0e-06
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene51274 SustainPine v3.0 572
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene53660 SustainPine v3.0 256
AutoFact: ethylene-dependent gravitropism-deficient and yellow-green-like 3 protein [Arabidopsis thaliana] gb|AAF97267.1|AC034106_10 F2H15.10 [Arabidopsis thaliana] gb|AEE29646.1| ethylene-dependent gravitropism-deficient and yellow-green-like 3 protein [Arabidopsi 5.0e-25
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene63003 SustainPine v3.0 157
AutoFact: putative GTP-binding protein CGPA [Arabidopsis thaliana] gb|AAK59667.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] gb|AAL34207.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] gb|AED97043.1| putative GTP-binding protein CGPA [Arab 7.0e-11
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75924 SustainPine v3.0 282
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene75934 SustainPine v3.0 282
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB45903.1| putative protein [Arabidopsis thaliana] emb|CAB79862.1| putative protein [Arabidopsis thaliana] gb|ABE65538.1| hypothetical protein At4g31440 [Arabidopsis thaliana] gb|AEE85913.1| uncharacteri 3.0e-09
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Os03g0762700 protein 3.411e-06
Internal
sp_v3.0_unigene78527 SustainPine v3.0 260
AutoFact: DUF726 domain-containing protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=D6RKG3_COPC7 2.0e-15
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene81033 SustainPine v3.0 195
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: cDNA clone:J023119C16, full insert sequence 4.873e-06
Putative C-terminus
sp_v3.0_unigene101024 SustainPine v3.0 402
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene111921 SustainPine v3.0 408
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene114503 SustainPine v3.0 214
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Os03g0176700 protein 7.31e-06
Internal
sp_v3.0_unigene128172 SustainPine v3.0 407
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene157683 SustainPine v3.0 497
AutoFact: Mitochondrial carrier domain-containing protein n=2 Tax=Toxoplasma gondii RepID=B6KIZ2_TOXGO 1.0e-08
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene163348 SustainPine v3.0 208
AutoFact: Unassigned protein
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain