Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene15800 SustainPine v3.0 1991
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Complete
sp_v3.0_unigene17976 SustainPine v3.0 1361
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene20177 SustainPine v3.0 211
AutoFact: Unassigned protein
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene35111 SustainPine v3.0 453
AutoFact: elongation factor EF-2 [Arabidopsis thaliana] gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13 [Arabidopsis thaliana] gb|AAK96653.1| elongation factor EF-2 [Arabidopsis thaliana] gb|AAN31808.1| putative elongation factor [Arabidopsis thaliana] gb|AAN31864.1| p 1.4013e-45
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 2 3.832e-36
Internal
sp_v3.0_unigene35718 SustainPine v3.0 685
AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene64545 SustainPine v3.0 173
AutoFact: Unassigned protein
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene93842 SustainPine v3.0 610
AutoFact: Os09g0515500 protein n=2 Tax=Oryza sativa RepID=Q69IM0_ORYSJ 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Translation initiation factor IF-2 4.56e-34
Internal
sp_v3.0_unigene94894 SustainPine v3.0 1766
AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
C-terminus
sp_v3.0_unigene128540 SustainPine v3.0 262
AutoFact: Unassigned protein
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene128589 SustainPine v3.0 511
AutoFact: Translation elongation factor-TU (Fragment) n=1 Tax=Glycine max RepID=O23962_SOYBN 4.0e-10
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EF-Tu 0.0
C-terminus
sp_v3.0_unigene148093 SustainPine v3.0 472
AutoFact: Elongation factor Tu n=3 Tax=Pleosporineae RepID=B2W7S5_PYRTR 8.40779e-45
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 3.641e-21
C-terminus
sp_v3.0_unigene150649 SustainPine v3.0 372
AutoFact: Elongation factor Tu n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWG4_9PROT 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene150797 SustainPine v3.0 204
AutoFact: Elongation factor Tu n=5 Tax=Flavobacteriales RepID=EFTU_FLAJ1 5.0e-18
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EF-Tu 0.0
Internal
sp_v3.0_unigene151096 SustainPine v3.0 450
AutoFact: Elongation factor Tu 1 n=2 Tax=Taylorella equigenitalis MCE9 RepID=E8UFB1_TAYEM 6.0e-33
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 4.509e-40
C-terminus
sp_v3.0_unigene151463 SustainPine v3.0 332
AutoFact: PREDICTED: elongation factor 2 [Danio rerio] 6.0e-31
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 2 1.304e-33
Internal
sp_v3.0_unigene151540 SustainPine v3.0 219
AutoFact: Elongation factor Tu n=4 Tax=Betaproteobacteria RepID=EFTU_AROAE 5.0e-33
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: EF-Tu 0.0
Putative C-terminus
sp_v3.0_unigene152397 SustainPine v3.0 351
AutoFact: Elongation factor Tu (Fragment) n=1 Tax=Flavobacterium johnsoniae RepID=D1MWP0_FLAJO 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene152521 SustainPine v3.0 507
AutoFact: Translation elongation factor 1A (EF-1A/EF-Tu) n=1 Tax=Fluviicola taffensis DSM 16823 RepID=F2I9Y1_FLUTR 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor Tu 0.0
Internal
sp_v3.0_unigene152770 SustainPine v3.0 253
AutoFact: Elongation factor Tu n=3 Tax=Candidatus Carsonella ruddii RepID=EFTU_CARRP 7.0e-16
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152998 SustainPine v3.0 395
AutoFact: Elongation factor Tu n=3 Tax=Candidatus Carsonella ruddii RepID=EFTU_CARRP 2.0e-27
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain