Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: tr=Lim domain protein; Pinus pinaster (Maritime pine).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11734 SustainPine v3.0 1501
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23382 SustainPine v3.0 733
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 1.0e-13
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: LIM-domain SF3 protein 4.386e-06
Putative Complete
sp_v3.0_unigene31799 SustainPine v3.0 380
• AutoFact: LIM protein n=1 Tax=Mytilus edulis RepID=Q2XT33_MYTED 7.0e-36
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
N-terminus
sp_v3.0_unigene70750 SustainPine v3.0 440
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 8.0e-17
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative C-terminus
sp_v3.0_unigene142278 SustainPine v3.0 1050
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene144594 SustainPine v3.0 657
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 3.0e-23
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Pollen-specific protein SF3, putative 2.573e-22
N-terminus
sp_v3.0_unigene149120 SustainPine v3.0 330
• AutoFact: Unassigned protein
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Internal
sp_v3.0_unigene152410 SustainPine v3.0 314
• AutoFact: Cysteine-rich protein 2 n=1 Tax=Salmo salar RepID=B9EP06_SALSA 4.0e-19
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
C-terminus
sp_v3.0_unigene152812 SustainPine v3.0 541
• AutoFact: LIM domain-containing protein E n=1 Tax=Dictyostelium discoideum RepID=LIME_DICDI 6.0e-09
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative C-terminus
sp_v3.0_unigene152874 SustainPine v3.0 338
• AutoFact: PREDICTED: LIM domain-containing protein 2-like [Danio rerio] 3.0e-23
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative Complete
sp_v3.0_unigene154391 SustainPine v3.0 333
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3B9C8_POLPA 7.0e-31
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative N-terminus
sp_v3.0_unigene155661 SustainPine v3.0 326
• AutoFact: Muscle LIM protein n=2 Tax=Branchiostoma RepID=Q9NDR6_BRABE 1.0e-13
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative N-terminus
sp_v3.0_unigene158626 SustainPine v3.0 277
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3B4V5_POLPA 4.0e-18
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative C-terminus
sp_v3.0_unigene158958 SustainPine v3.0 170
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 4.0e-10
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: LIM-domain SF3 protein 4.386e-06
Putative N-terminus
sp_v3.0_unigene159062 SustainPine v3.0 446
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 4.0e-14
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: LIM-domain SF3 protein 4.386e-06
N-terminus
sp_v3.0_unigene166639 SustainPine v3.0 391
• AutoFact: pfam00412, LIM, LIM domain 2.0e-06
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative N-terminus
sp_v3.0_unigene191449 SustainPine v3.0 432
• AutoFact: LIM domain containing protein 4.0e-12
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain