Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3311 SustainPine v3.0 1241
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene23619 SustainPine v3.0 826
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene24008 SustainPine v3.0 1078
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene25587 SustainPine v3.0 865
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 1.0e-35
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Putative Complete
sp_v3.0_unigene25814 SustainPine v3.0 593
• AutoFact: Ribosomal protein L6e (Fragment) n=1 Tax=Carabus granulatus RepID=Q4GXM9_CARGR 4.00001e-41
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 5.87144e-42
Putative C-terminus
sp_v3.0_unigene26180 SustainPine v3.0 354
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SVY4_PHYPA 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene26489 SustainPine v3.0 421
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBR7_THAPS 6.0e-38
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene26550 SustainPine v3.0 343
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 2.0e-09
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene27652 SustainPine v3.0 616
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 1.96182e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene28528 SustainPine v3.0 283
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Postia placenta Mad-698-R RepID=B8P336_POSPM 5.0e-22
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene35839 SustainPine v3.0 620
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 9.99967e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene51700 SustainPine v3.0 394
• AutoFact: PREDICTED: 60S ribosomal protein L6-like n=1 Tax=Anolis carolinensis RepID=UPI000203A4D7 1.0e-36
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene55855 SustainPine v3.0 332
• AutoFact: Ribosomal protein rpl6 n=1 Tax=Eurythoe complanata RepID=A8UFZ6_EURCO 9.94922e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene75370 SustainPine v3.0 380
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZV7_PHYIT 1.0e-07
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 1.754e-22
Internal
sp_v3.0_unigene75725 SustainPine v3.0 200
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Monosiga brevicollis RepID=A9UQ35_MONBE 9.0e-16
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 2.344e-20
Internal
sp_v3.0_unigene78269 SustainPine v3.0 171
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Chlorella variabilis RepID=E1ZAC3_9CHLO 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene118752 SustainPine v3.0 262
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CYH9_LACBS 6.0e-26
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene126742 SustainPine v3.0 1082
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene128672 SustainPine v3.0 405
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 3.0e-07
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 2.0e-08
C-terminus
sp_v3.0_unigene138302 SustainPine v3.0 191
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 3.0e-09
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain