Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1397 SustainPine v3.0 1096
• AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 0.0
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene34386 SustainPine v3.0 560
• AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 0.0
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene36675 SustainPine v3.0 792
• AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 8.0e-36
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene48207 SustainPine v3.0 479
• AutoFact: DNA replication ATP-dependent helicase Dna2 n=3 Tax=Arabidopsis thaliana RepID=F4HXR6_ARATH 7.0e-23
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene54859 SustainPine v3.0 406
• AutoFact: putative aquarius [Oryza sativa Japonica Group] gb|EEE59165.1| hypothetical protein OsJ_11087 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene74138 SustainPine v3.0 449
• AutoFact: Unassigned protein
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76245 SustainPine v3.0 420
• AutoFact: Intron-binding protein aquarius n=3 Tax=Arabidopsis RepID=Q8L5Y4_ARATH 0.0
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene97187 SustainPine v3.0 990
• AutoFact: PREDICTED: similar to zinc finger, NFX1-type containing 1 n=1 Tax=Ciona intestinalis RepID=UPI000180BF88 0.0
• FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain