Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene17798 SustainPine v3.0 1393
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a/b-binding protein 0.0
Misassembled
sp_v3.0_unigene22121 SustainPine v3.0 1184
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a/b-binding protein 0.0
Complete
sp_v3.0_unigene34658 SustainPine v3.0 1487
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a/b-binding protein 0.0
Misassembled
sp_v3.0_unigene51402 SustainPine v3.0 476
AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 5.572e-24
C-terminus
sp_v3.0_unigene51560 SustainPine v3.0 326
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-10
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a-b binding protein of LHCII 1.762e-10
Putative N-terminus
sp_v3.0_unigene51951 SustainPine v3.0 344
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 4.147e-31
Internal
sp_v3.0_unigene53519 SustainPine v3.0 456
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 6.075e-29
Internal
sp_v3.0_unigene55028 SustainPine v3.0 497
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.883e-29
C-terminus
sp_v3.0_unigene56905 SustainPine v3.0 415
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 6.372e-29
Internal
sp_v3.0_unigene58781 SustainPine v3.0 256
AutoFact: putative chlorophyll a/b binding protein [Triticum turgidum subsp. durum] 9.0e-35
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.837e-21
Internal
sp_v3.0_unigene65571 SustainPine v3.0 231
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 1.0e-31
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.175e-33
Internal
sp_v3.0_unigene65949 SustainPine v3.0 112
AutoFact: Chlorophyll a-b binding protein 3C, chloroplastic n=40 Tax=Magnoliophyta RepID=CB2G_SOLLC 8.0e-07
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene73477 SustainPine v3.0 439
AutoFact: Chlorophyll a-b binding protein type 2 member 2 (Fragment) n=5 Tax=Coniferales RepID=CB22_PINSY 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 3.607e-29
C-terminus
sp_v3.0_unigene74194 SustainPine v3.0 289
AutoFact: chloroplast chlorophyll a/b binding protein [Pachysandra terminalis] 1.0e-38
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.736e-21
Internal
sp_v3.0_unigene76295 SustainPine v3.0 154
AutoFact: Light-harvesting chlorphyll binding protein 3 (Fragment) n=1 Tax=Solenostemon scutellarioides RepID=C9VWR2_SOLSC 3.0e-16
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.249e-13
Putative C-terminus
sp_v3.0_unigene80176 SustainPine v3.0 235
AutoFact: Chloroplast light-harvesting complex I protein Lhca9 n=1 Tax=Acetabularia acetabulum RepID=A4QPJ7_ACEAT 5.0e-17
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Internal
sp_v3.0_unigene80694 SustainPine v3.0 193
AutoFact: chlorophyll a/b-binding protein [Mesembryanthemum crystallinum] 1.0e-20
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.191e-18
Internal
sp_v3.0_unigene81681 SustainPine v3.0 408
AutoFact: Chlorophyll a-b binding protein 4, chloroplastic n=2 Tax=core eudicotyledons RepID=CB24_SOLLC 3.0e-29
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 3.328e-14
Internal
sp_v3.0_unigene101904 SustainPine v3.0 523
AutoFact: Chlorophyll A/B binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V1_RICCO 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.445e-38
Internal
sp_v3.0_unigene120281 SustainPine v3.0 320
AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO 5.0e-19
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain