Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene152181 SustainPine v3.0 462
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 1.0e-39
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene152473 SustainPine v3.0 498
• AutoFact: Ribosomal protein L27, component of cytosolic 80S ribosome and 60S large subunit [Ostreococcus lucimarinus CCE9901] gb|ABO95935.1| Ribosomal protein L27, component of cytosolic 80S ribosome and 60S large subunit [Ostreococcus lucimarinus CCE9901] 5.0e-37
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene152612 SustainPine v3.0 414
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Araneae RepID=B5M6E5_HAPSC 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene153242 SustainPine v3.0 378
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ7_PHYIT 2.0e-33
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S subunit ribosomal protein L27 4.873e-06
C-terminus
sp_v3.0_unigene153372 SustainPine v3.0 304
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Acyrthosiphon pisum RepID=Q201Y4_ACYPI 6.0e-24
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative N-terminus
sp_v3.0_unigene153488 SustainPine v3.0 383
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 8.0e-30
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 3.63357e-42
C-terminus
sp_v3.0_unigene153531 SustainPine v3.0 444
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ7_PHYIT 8.0e-22
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene154008 SustainPine v3.0 474
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 3.0e-40
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene154348 SustainPine v3.0 500
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ7_PHYIT 1.0e-27
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 7.171e-28
Putative Complete
sp_v3.0_unigene154661 SustainPine v3.0 423
• AutoFact: 60S ribosomal protein L27 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WSC8_9STRA 3.0e-38
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative Complete
sp_v3.0_unigene155196 SustainPine v3.0 297
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Onchocercidae RepID=A8PKC6_BRUMA 2.0e-13
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene156002 SustainPine v3.0 346
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Volvox carteri f. nagariensis RepID=D8TTF8_VOLCA 2.0e-31
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
N-terminus
sp_v3.0_unigene165550 SustainPine v3.0 374
• AutoFact: 60S ribosomal protein L27-B n=4 Tax=Pleosporineae RepID=B2VT56_PYRTR 9.99995e-41
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
C-terminus
sp_v3.0_unigene188816 SustainPine v3.0 606
• AutoFact: 60S subunit ribosomal protein L27 n=1 Tax=Thalassiosira pseudonana RepID=B8CDJ9_THAPS 6.0e-31
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S subunit ribosomal protein L27 9.747e-06
Putative Complete
sp_v3.0_unigene191313 SustainPine v3.0 384
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Polysphondylium pallidum RepID=D3BK76_POLPA 9.0e-15
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene196687 SustainPine v3.0 364
• AutoFact: 60s ribosomal protein l27, putative n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6QYN3_CRYGW 6.0e-19
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene202726 SustainPine v3.0 464
• AutoFact: 60S ribosomal protein L27-A n=2 Tax=Schizosaccharomyces pombe 972h- RepID=RL27A_SCHPO 2.0e-28
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene204656 SustainPine v3.0 504
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 2.0e-37
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene204726 SustainPine v3.0 468
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CH78_9EUKA 6.0e-38
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene205023 SustainPine v3.0 532
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Chlamydomonas reinhardtii RepID=A8IQC1_CHLRE 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain