Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene375 SustainPine v3.0 1354
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene1022 SustainPine v3.0 1073
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene24673 SustainPine v3.0 347
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-21
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene24783 SustainPine v3.0 505
AutoFact: PREDICTED: similar to ribosomal protein L13 n=1 Tax=Ciona intestinalis RepID=UPI00006A7442 2.0e-29
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene25962 SustainPine v3.0 549
AutoFact: 60S ribosomal protein L13 n=1 Tax=Polytomella sp. Pringsheim 198.80 RepID=Q84VS7_9CHLO 6.0e-38
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene26274 SustainPine v3.0 728
AutoFact: 60S ribosomal protein L13 (Fragment) n=1 Tax=Chironomus thummi RepID=A2IA72_9DIPT 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene27403 SustainPine v3.0 737
AutoFact: 60S ribosomal protein L13 n=1 Tax=Xenopsylla cheopis RepID=A2IAC5_9NEOP 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene30833 SustainPine v3.0 713
AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Complete
sp_v3.0_unigene31143 SustainPine v3.0 602
AutoFact: 60S ribosomal protein L13 n=1 Tax=Lysiphlebus testaceipes RepID=Q56FE7_LYSTE 4.2039e-45
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene35906 SustainPine v3.0 631
AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Putative Complete
sp_v3.0_unigene36662 SustainPine v3.0 340
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 2.0e-08
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene37787 SustainPine v3.0 733
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene59765 SustainPine v3.0 236
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-16
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 1.393e-20
Internal
sp_v3.0_unigene75962 SustainPine v3.0 224
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 7.0e-15
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
Misassembled
sp_v3.0_unigene76346 SustainPine v3.0 339
AutoFact: 60S ribosomal protein L13 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CPG6_LACBS 4.99983e-42
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene144877 SustainPine v3.0 423
AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 2.8026e-45
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene144918 SustainPine v3.0 257
AutoFact: 60S ribosomal protein L13 n=2 Tax=Elaeis guineensis RepID=B3TM24_ELAGV 5.0e-18
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 2.088e-40
Putative C-terminus
sp_v3.0_unigene152604 SustainPine v3.0 298
AutoFact: 60S ribosomal protein L13 n=1 Tax=Chlorella variabilis RepID=E1ZRL8_9CHLO 8.0e-09
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene154031 SustainPine v3.0 452
AutoFact: 60S ribosomal protein L13 n=7 Tax=Clupeocephala RepID=RL13_DANRE 5.99994e-41
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene156764 SustainPine v3.0 236
AutoFact: Ribosomal Protein, Large subunit family member (rpl-13) [Caenorhabditis elegans] sp|P91128.1|RL13_CAEEL RecName: Full=60S ribosomal protein L13 gb|AAB42322.1| Ribosomal protein, large subunit protein 13, isoform a, confirmed by transcript evidence [Caenor 9.0e-05
FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain