Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=4-coumarate:CoA ligase; Pinus massoniana.

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene619 SustainPine v3.0 2339
AutoFact: Acyl-CoA synthetase [Ricinus communis] gb|ABC02881.1| ACS2 [Ricinus communis] gb|EEF45375.1| Acyl-CoA synthetase [Ricinus communis] 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: AMP-binding protein 4.273e-10
C-terminus
sp_v3.0_unigene2729 SustainPine v3.0 2104
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene8513 SustainPine v3.0 2081
AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: Putative acyl-CoA synthetase 5.862e-23
Putative Complete
sp_v3.0_unigene15868 SustainPine v3.0 1989
AutoFact: 4-coumarate--CoA ligase-like 1 [Arabidopsis thaliana] sp|Q9LQ12.1|4CLL1_ARATH RecName: Full=4-coumarate--CoA ligase-like 1; AltName: Full=4-coumarate--CoA ligase isoform 10; Short=At4CL10 gb|AAF75805.1|AC011000_8 Strong similarity to 4-coumarate:CoA ligas 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 9.758e-22
Complete
sp_v3.0_unigene21120 SustainPine v3.0 470
AutoFact: 4-coumarate:CoA ligase n=1 Tax=Ipomoea batatas RepID=B6F2H0_IPOBA 3.0e-12
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
C-terminus
sp_v3.0_unigene25251 SustainPine v3.0 1723
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 1.429e-35
C-terminus
sp_v3.0_unigene31154 SustainPine v3.0 2477
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene31876 SustainPine v3.0 1998
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 0.0
Putative Complete
sp_v3.0_unigene64393 SustainPine v3.0 152
AutoFact: 4-coumarate:coenzyme A ligase 3 n=4 Tax=Funariaceae RepID=B7SBA1_PHYPA 3.0e-12
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 7.28675e-44
Internal
sp_v3.0_unigene74531 SustainPine v3.0 234
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-13
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Internal
sp_v3.0_unigene76643 SustainPine v3.0 271
AutoFact: Similar to phenylacetyl-CoA ligase n=1 Tax=Leptosphaeria maculans RepID=E5AD00_LEPMC 9.0e-39
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: Coumaryl-coa ligase 2.437e-06
Putative C-terminus
sp_v3.0_unigene127584 SustainPine v3.0 942
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene132918 SustainPine v3.0 518
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-23
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 1.007e-34
Internal
sp_v3.0_unigene143611 SustainPine v3.0 472
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: 4-coumarate:CoA ligase 0.0
Internal
sp_v3.0_unigene144319 SustainPine v3.0 372
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 1.0e-17
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
C-terminus
sp_v3.0_unigene149945 SustainPine v3.0 337
AutoFact: 4-coumarate--CoA ligase 3 n=3 Tax=Arabidopsis RepID=4CL3_ARATH 1.0e-13
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Putative N-terminus
sp_v3.0_unigene200333 SustainPine v3.0 335
AutoFact: Long-chain-fatty-acid--CoA ligase 5 (Fragment) n=1 Tax=Ascaris suum RepID=F1KZZ5_ASCSU 6.0e-26
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Sma3: Long chain acyl-coA synthetase 4.386e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain