Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene76030 SustainPine v3.0 301
• AutoFact: Elongation factor 1 alpha (Fragment) n=3 Tax=Eukaryota RepID=A7J577_9LECA 1.99993e-41
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 9.927e-22
Internal
sp_v3.0_unigene76803 SustainPine v3.0 397
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Saccharomycetales RepID=A9QAA2_9ASCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 9.992e-33
Internal
sp_v3.0_unigene77204 SustainPine v3.0 217
• AutoFact: Translation elongation factor 1A-like protein (Fragment) n=1 Tax=Reticulomyxa filosa RepID=B5A4Q1_RETFI 3.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor-like 4.336e-32
Internal
sp_v3.0_unigene79033 SustainPine v3.0 366
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 2.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.186e-26
Internal
sp_v3.0_unigene79239 SustainPine v3.0 284
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.299e-36
Misassembled
sp_v3.0_unigene79939 SustainPine v3.0 121
• AutoFact: Elongation factor 1-alpha n=1 Tax=Seculamonas ecuadoriensis RepID=C1K9U6_9EUKA 3.0e-09
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.44e-17
Internal
sp_v3.0_unigene81147 SustainPine v3.0 192
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=2 Tax=Agaricomycetidae RepID=D8WM70_9HOMO 1.0e-19
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81351 SustainPine v3.0 194
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 7.0e-23
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.39e-31
Internal
sp_v3.0_unigene81451 SustainPine v3.0 186
• AutoFact: Elongation factor-1 alpha (Fragment) n=11 Tax=Triaenonychidae RepID=D7RGG5_9ARAC 5.0e-27
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene102674 SustainPine v3.0 377
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.42e-29
Internal
sp_v3.0_unigene116101 SustainPine v3.0 377
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=E9P1K2_MUSAC 0.0001
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119540 SustainPine v3.0 461
• AutoFact: Elongation factor 1 alpha n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HRH1_AJECH 6.0e-40
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene121393 SustainPine v3.0 166
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.636e-34
Internal
sp_v3.0_unigene124325 SustainPine v3.0 98
• AutoFact: Unassigned protein
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene124416 SustainPine v3.0 177
• AutoFact: translation elongation factor-1 alpha [Picea abies] 2.0e-14
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.929e-16
Internal
sp_v3.0_unigene129258 SustainPine v3.0 675
• AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 4.2039e-45
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.814e-09
Putative C-terminus
sp_v3.0_unigene141263 SustainPine v3.0 480
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=E9P1K2_MUSAC 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene143206 SustainPine v3.0 534
• AutoFact: Elongation factor-1 alpha (Fragment) n=5 Tax=Eukaryota RepID=A9QA20_CATRO 7.0e-29
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.643e-31
Internal
sp_v3.0_unigene145928 SustainPine v3.0 671
• AutoFact: Elongation factor 1-alpha n=1 Tax=Arabidopsis thaliana RepID=F4HUA0_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.14644e-42
Internal
sp_v3.0_unigene145974 SustainPine v3.0 1351
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain