Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9577 SustainPine v3.0 3414
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene9736 SustainPine v3.0 3187
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10078 SustainPine v3.0 1016
AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
N-terminus
sp_v3.0_unigene29119 SustainPine v3.0 3501
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37578 SustainPine v3.0 1519
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.39e-12
Putative N-terminus
sp_v3.0_unigene37790 SustainPine v3.0 1008
AutoFact: Coatomer subunit beta, putative n=1 Tax=Ricinus communis RepID=B9RNM4_RICCO 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
C-terminus
sp_v3.0_unigene53491 SustainPine v3.0 161
AutoFact: Unassigned protein 1.0e-05
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene60895 SustainPine v3.0 173
AutoFact: putative coatmer beta subunit [Fragaria x ananassa] 3.0e-15
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 6.195e-09
Internal
sp_v3.0_unigene62241 SustainPine v3.0 117
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62878 SustainPine v3.0 243
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 1.0e-17
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 1.042e-12
Internal
sp_v3.0_unigene64812 SustainPine v3.0 130
AutoFact: Beta-COP-like protein [Arabidopsis thaliana] emb|CAB79867.1| Beta-COP-like protein [Arabidopsis thaliana] 1.0e-08
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 6.743e-09
Internal
sp_v3.0_unigene67442 SustainPine v3.0 167
AutoFact: Unassigned protein
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 4.107e-09
Internal
sp_v3.0_unigene70896 SustainPine v3.0 389
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 2.0e-06
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.773e-09
C-terminus
sp_v3.0_unigene72158 SustainPine v3.0 149
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene72581 SustainPine v3.0 237
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 1.0e-29
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.31e-13
Putative C-terminus
sp_v3.0_unigene73000 SustainPine v3.0 172
AutoFact: putative coatmer beta subunit (beta-coat protein) (beta-COP) [Oryza sativa Japonica Group] 4.0e-17
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 5.105e-13
Putative C-terminus
sp_v3.0_unigene75177 SustainPine v3.0 241
AutoFact: putative coatmer beta subunit [Fragaria x ananassa] 2.0e-16
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta-2 6.195e-09
Internal
sp_v3.0_unigene77619 SustainPine v3.0 389
AutoFact: Coatomer protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DLV5_LACBS 5.0e-40
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene131694 SustainPine v3.0 714
AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
C-terminus
sp_v3.0_unigene134379 SustainPine v3.0 280
AutoFact: Coatomer subunit beta-1 n=7 Tax=Poaceae RepID=COPB1_ORYSJ 2.0e-32
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit beta 6.528e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain