Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene118670 SustainPine v3.0 335
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 3.0e-24
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 4.865e-17
Internal
sp_v3.0_unigene119775 SustainPine v3.0 383
AutoFact: DNA-directed RNA polymerase n=4 Tax=Agaricomycetidae RepID=D8PLU0_SCHCM 1.0e-25
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene139592 SustainPine v3.0 350
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Spermatophyta RepID=E0CQW1_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Internal
sp_v3.0_unigene141255 SustainPine v3.0 348
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 2.0e-27
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 5.553e-12
Internal
sp_v3.0_unigene145284 SustainPine v3.0 1207
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 4.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Extensin 3.042e-30
C-terminus
sp_v3.0_unigene148289 SustainPine v3.0 377
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 9.526e-27
Internal
sp_v3.0_unigene148862 SustainPine v3.0 568
AutoFact: DNA-directed RNA polymerase n=3 Tax=Tracheophyta RepID=D8SYZ7_SELML 1.0e-26
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene157692 SustainPine v3.0 319
AutoFact: DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3ZBW5_BRAFL 7.0e-32
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 1.956e-07
Internal
sp_v3.0_unigene162932 SustainPine v3.0 333
AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8SQN3_SELML 1.4013e-45
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 2.96e-18
Internal
sp_v3.0_unigene163706 SustainPine v3.0 328
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 6.0e-17
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 4.948e-18
Internal
sp_v3.0_unigene168179 SustainPine v3.0 295
AutoFact: DNA-directed RNA polymerase (Fragment) n=10 Tax=Spermatophyta RepID=Q2TUN6_GINBI 2.0e-32
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: RNA polymerase II largest subunit 6.855e-36
Internal
sp_v3.0_unigene192819 SustainPine v3.0 454
AutoFact: DNA-directed RNA polymerase subunit 1 n=2 Tax=Acanthamoeba polyphaga mimivirus RepID=RPO1_MIMIV 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain