Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5813 SustainPine v3.0 1075
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC3 protein 4.107e-09
N-terminus
sp_v3.0_unigene40672 SustainPine v3.0 1735
AutoFact: kinetochore protein Nuf2 [Arabidopsis thaliana] gb|AAL87331.1| unknown protein [Arabidopsis thaliana] gb|AAM91790.1| unknown protein [Arabidopsis thaliana] gb|AEE33765.1| kinetochore protein Nuf2 [Arabidopsis thaliana] 2.0e-38
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene150453 SustainPine v3.0 497
AutoFact: Putative SMC family protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSM0_9BACT 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene153318 SustainPine v3.0 508
AutoFact: Structural maintenance of chromosomes protein 3 n=50 Tax=Euteleostomi RepID=SMC3_HUMAN 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SMC3 protein 3.168e-09
N-terminus
sp_v3.0_unigene157442 SustainPine v3.0 401
AutoFact: Myosin-9 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C6K8_9EUKA 5.0e-11
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene157501 SustainPine v3.0 478
AutoFact: PREDICTED: similar to U1 small nuclear ribonucleoprotein 1C n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001554AF4 7.0e-37
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene159556 SustainPine v3.0 435
AutoFact: structural maintenance of chromosomes protein 2-2 [Arabidopsis thaliana] sp|Q9SN90.1|SMC22_ARATH RecName: Full=Structural maintenance of chromosomes protein 2-2; Short=AtSMC2-2; AltName: Full=Chromosome-associated protein E-2; Short=AtCAP-E2 emb|CAB61972. 1.0e-24
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Condensin complex components subunit 4.493e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain