Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene55991 SustainPine v3.0 230
• AutoFact: RNA-directed RNA polymerase n=6 Tax=Solanum RepID=Q9ZR58_SOLLC 6.0e-09
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: RNA-directed RNA polymerase, putative 1.017e-17
Internal
sp_v3.0_unigene61302 SustainPine v3.0 281
• AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 2.0e-31
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 2.621e-08
Internal
sp_v3.0_unigene64841 SustainPine v3.0 159
• AutoFact: RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 dbj|BAC00725.1| putative RNA-dependent RNA polymerase [Oryza sativa Japonica Group] dbj|BAF80151.1| SHOOTLESS2 [Oryza sativa Japonica Group] 1.0e-07
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene73701 SustainPine v3.0 323
• AutoFact: RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 dbj|BAC00725.1| putative RNA-dependent RNA polymerase [Oryza sativa Japonica Group] dbj|BAF80151.1| SHOOTLESS2 [Oryza sativa Japonica Group] 7.0e-31
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 3.812e-12
Internal
sp_v3.0_unigene79309 SustainPine v3.0 234
• AutoFact: putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] 1.0e-17
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 1.948e-08
Internal
sp_v3.0_unigene124867 SustainPine v3.0 318
• AutoFact: Probable RNA-dependent RNA polymerase SHL2 n=1 Tax=Oryza sativa Japonica Group RepID=SHL2_ORYSJ 4.0e-06
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene149296 SustainPine v3.0 190
• AutoFact: RNA-dependent RNA polymerase 6 n=6 Tax=Nicotiana RepID=A9CRC9_TOBAC 3.0e-14
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Rna-dependent RNA polymerase 3.009e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain