Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3803 SustainPine v3.0 2866
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene3927 SustainPine v3.0 953
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene3929 SustainPine v3.0 1790
AutoFact: F-box-like domain containing protein 1.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene4143 SustainPine v3.0 814
AutoFact: Nop14 domain containing protein 3.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene4377 SustainPine v3.0 1639
AutoFact: Lung_7-TM_R domain containing protein 3.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene4381 SustainPine v3.0 609
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene4436 SustainPine v3.0 729
AutoFact: AP2 domain containing protein 7.0e-07
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Ethylene-responsive transcription factor 4 8.39e-22
Internal
sp_v3.0_unigene4491 SustainPine v3.0 555
AutoFact: DNA-dependent protein kinase subunit [Dictyostelium discoideum AX4] sp|Q54UC0.2|PRKDC_DICDI RecName: Full=DNA-dependent protein kinase catalytic subunit; Short=DNA-PK catalytic subunit; Short=DNA-PKcs gb|EAL66880.2| DNA-dependent protein kinase subunit [D 4.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene4567 SustainPine v3.0 597
AutoFact: Methyltransf_15 multi-domain protein 1.99993e-41
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene4587 SustainPine v3.0 397
AutoFact: nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] gb|AEE36384.1| nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] 4.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene4666 SustainPine v3.0 659
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene4698 SustainPine v3.0 533
AutoFact: nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] gb|AEE36384.1| nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] 1.0e-37
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene5537 SustainPine v3.0 1916
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene5542 SustainPine v3.0 2736
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene5658 SustainPine v3.0 2812
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FGN3.1|FB290_ARATH RecName: Full=F-box protein At5g51380 dbj|BAB09749.1| unnamed protein product [Arabidopsis thaliana] gb|AAV84497.1| At5g51380 [Arabidopsis thaliana] gb|AAW30025.1| At5g51380 [Arabidopsis thalian 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene5770 SustainPine v3.0 2526
AutoFact: tetratricopeptide repeat protein 39A isoform 1 [Mus musculus] sp|A2ACP1.1|TT39A_MOUSE RecName: Full=Tetratricopeptide repeat protein 39A; Short=TPR repeat protein 39A emb|CAM13657.1| tetratricopeptide repeat domain 39A [Mus musculus] 2.0e-34
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene5812 SustainPine v3.0 2485
AutoFact: Myosin_tail_1 multi-domain protein 8.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene5862 SustainPine v3.0 1238
AutoFact: pfam01476, LysM, LysM domain 9.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene5869 SustainPine v3.0 1227
AutoFact: PREDICTED: LSM11, U7 small nuclear RNA associated [Danio rerio] ref|XP_003199983.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm11-like [Danio rerio] 9.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene5872 SustainPine v3.0 1981
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain