Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene30897 SustainPine v3.0 1071
AutoFact: COMM domain-containing protein 4 [Mus musculus] sp|Q9CQ02.1|COMD4_MOUSE RecName: Full=COMM domain-containing protein 4 dbj|BAB23207.1| unnamed protein product [Mus musculus] dbj|BAB26512.1| unnamed protein product [Mus musculus] gb|AAH49222.1| COMM domain 5.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene31186 SustainPine v3.0 1048
AutoFact: DUF810 domain containing protein 2.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene31412 SustainPine v3.0 830
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene31454 SustainPine v3.0 1013
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene31911 SustainPine v3.0 600
AutoFact: acyl CoA binding family protein [Aspergillus niger CBS 513.88] emb|CAK38153.1| unnamed protein product [Aspergillus niger] 4.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene32126 SustainPine v3.0 605
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene32907 SustainPine v3.0 606
AutoFact: Acyl CoA binding protein n=1 Tax=Glomerella graminicola M1.001 RepID=E3QQV5_COLGM 2.0e-30
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene33173 SustainPine v3.0 1015
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene33237 SustainPine v3.0 595
AutoFact: RNA-binding protein precursor [Solanum tuberosum] 3.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Putative RNA-binding protein 5.644e-08
Complete
sp_v3.0_unigene34183 SustainPine v3.0 955
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene34196 SustainPine v3.0 2701
AutoFact: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain [Arabidopsis thaliana] gb|AEE27246.1| Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain [Arabidopsis thaliana] 7.0e-12
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene34389 SustainPine v3.0 555
AutoFact: VQ domain containing protein 1.0e-07
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene34396 SustainPine v3.0 837
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene34403 SustainPine v3.0 1244
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene34515 SustainPine v3.0 542
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 4.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene34549 SustainPine v3.0 2929
AutoFact: cold-induced thioredoxin domain-containing protein [Ammopiptanthus mongolicus] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene34648 SustainPine v3.0 486
AutoFact: putative SET domain protein SDG117 [Oryza sativa Japonica Group] 4.0e-14
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: SET domain protein 2.095e-06
C-terminus
sp_v3.0_unigene34751 SustainPine v3.0 2147
AutoFact: ZPR1 zinc-finger domain protein [Arabidopsis thaliana] gb|AED93032.1| ZPR1 zinc-finger domain protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Zinc finger protein-like 7.907e-10
Complete
sp_v3.0_unigene34922 SustainPine v3.0 1268
AutoFact: RING-type E3 ubiquitin ligase [Oryza sativa Indica Group] gb|EEE56640.1| hypothetical protein OsJ_06048 [Oryza sativa Japonica Group] 8.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene35175 SustainPine v3.0 446
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain